Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0893 ATGTCTGCAAGGAATGAACACCATACTGCCCCCCTTTCGGTGCTTCTGAAGCGGGAATTGGCAAATGAGAAAATTGAGAAACCAGAAATTATGCACGGTCAAGCCAGCCAGAGCAAAAAAGGCGAAGATTTCGCGCTAATAAAGACGGAATGCCAAAGGGTGGTGGGAGATGGGGGGTCTACTTATTCTATTTTTCGGCTATTTGATGGGCACAACGGATCTGCTGCTGCAACTTATTCCAAGGAGAATCTGTTAAATAATGCTTTAAATGCGGTTCCCCCAGATCATAGCAGAGAGGAGTGGGTGTCAGCATTGCCTAGGGCTTTGGTTGCAGGCTTTGTCAAAACTGATAAAGATTTTCAAGAGAAAGGACAAAAATCAGGAACAACAGTAACCTTTGTGATTATTGAAGGATGGGTTGTTACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAGCCTTCTGAAGGTGGTATATATTACTTGAGGGTGCGTATAACCGCTAGCGGAAGTGAGGTTGGTCGTCTAAATACTGGTGGAGGCGCACAGCCAAAAGAAAGTGGCTCTGCTTGTGGCTTTGTGCATAAATCCAATACATCTAGATCCATTGGTGATATGGATATTAGTGGATATATTGTTCCTGTACCTTATGTGAAGCAAGTGAAGCTGTCCACTGCTGGAGGCAGGCTTATTATCTGTAGTGATGGTGTTTGGGATGCTTTGACTGCAGAAGCAGCCCTTGATTGTTGTCGTGGCATGGCAGCAGATGTTGCAGCATCCCTTCTTGTTAGAGAACCAGATGTGGTAGGGGAACTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGAGATCAAACCTGGAGAGGGTATTTCAATCCATGCAGGTGTTGGAAGGAAAACGCGCCCTGAGATGGACCTTTTCTTTGTTTAAGTTGCCAGGAGAAGAAAGAAGCAATGGAAGGGAAAAGAACATCAGATAG 984 0.4522 MSARNEHHTAPLSVLLKRELANEKIEKPEIMHGQASQSKKGEDFALIKTECQRVVGDGGSTYSIFRLFDGHNGSAAATYSKENLLNNALNAVPPDHSREEWVSALPRALVAGFVKTDKDFQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGIYYLRVRITASGSEVGRLNTGGGAQPKESGSACGFVHKSNTSRSIGDMDISGYIVPVPYVKQVKLSTAGGRLIICSDGVWDALTAEAALDCCRGMAADVAASLLVREPDVVGELYEEGSAMLSERRSNLERVFQSMQVLEGKRALRWTFSLFKLPGEERSNGREKNIR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0893 327 PANTHER PROTEIN PHOSPHATASE 27 266 - -
Lele28g0893 327 CDD PP2Cc 39 266 IPR001932 -
Lele28g0893 327 SMART PP2C_4 21 282 IPR001932 -
Lele28g0893 327 Gene3D - 31 287 IPR036457 -
Lele28g0893 327 Pfam Protein phosphatase 2C 57 257 IPR001932 -
Lele28g0893 327 ProSiteProfiles PPM-type phosphatase domain profile. 24 327 IPR001932 -
Lele28g0893 327 SUPERFAMILY PP2C-like 37 265 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0893 Lele-ChrLele28 5761903 5765626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0893 1 266 PP2C-type Phosphatase Gene Family AT1G47380 68.705 7.60e-135 388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0905 25 5785238 5789031 Lele28g0893 28 5761903 5765626 hybridization