Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0891 ATGCAAGTGGTGGGGAGGCTAGGCAGCTACATTAGTCGGGGTGTATCCACGGTGTCAGGCACCGTTCGTCCCCTTGGTGGCGCTGTAGATATTGTTTTAGTTGAACAGCAAGATGGGAGCTTCAAGTCGTCGCCTTGGTACGTCCGATTTGGGAAATCCCATGGCGTTTTAAGGACAGAAGAGAGGATGATCAGCATTAATGTCAATGGAGAGGAAGCAAATTTCCATATGTATATGGATCATAAAGGTCAAGCCTTCTTTCTCAGGGAGGTCGAAGCGGAAGAGGGAGAATCTACGTTGTATCCATTATCTTCTGGGGATGAGACAGATATTCTGGATAAGCGGCATTTGAAGTCCAGAAGTTTTAGTTTCGAAGACAAATCAGATTATATGGCTCAGGGTTATATGGACACAGGAAATATGCTGGCCAGAACTACTTCTGACGGATCAATGACAAGTGGGCTTTTCATTGCCGATAATAATTTTCAGCGGGAGGTTCTCAATGCTGATACGAACAATGCACGTTCATTGGAGTGTGCTGAGCTTGCAGCCAACCTGTTGGAGGTAAAGTGGTCTACCAATCTTGCTGGTCATAAACCGCCTCGAAAAGATCGTGTAAAATTTCGAAAGAGAAAACCTCAGCATGATAACATGGAGAATTCTTCAGACCAACGTAGATTCTATGATGAAGCTTGTTCCCTTTATGTGCAAGACGGCATCTGTTCCAACCCAGACCTTGAGGTTCCTGGAGGACTTGATGAGGATAACGGTATATGCTCATCATGTTCAAGCACCTCCGTTGAAGTTAGCTTTTCAAAACAGAAAACTGAAGTGATAACTGAACTACCAATGAGTGGTGATATTGCAGAGCACACTGATGGAGTTCAGCCACTAGTTTATAGTGAAATGTCAAAGAGTTCAATTGGATGCATGCATTGTACCACAGAACAAACTCATGAGGTGTTTTACCTTGATAACAAAATAGGTGAAGTACATACTCATGCAGAGATTTTACAAGCGGCAGCAGTACTACCTGAGGTTACAAAAAAAGAGGAAGTCACCAAAAATGCTGATGTCATGATGCCTGTCATGATGGTTTCTAAAACTTCTCAGCAAGCAAATTGTGCTCATCCTGGCATTAGCAAGTCTACTGTGGAAGATATTGAAGACCAAACAGCACTGCCAAAAATTCAAACGATCAATCTGGATATTGGACTTTGTTCAGCTGAGAAGGATGGATCAAAATGTGTTGCTGCTACGCCACAGGACTCAGCATGCAATATCTTGAAGCATCCATCATTTGGGAAAGATGATATGAAATGTCTGAAACCAGATGACCAATTATTACCTGAGGAGTCAGGCTTGTATTCTATAAAAGCAGATCAAGCTGGCATGATATCTGTTTGTAAGCATTTGCTATATGAAGGAATGGGAGCTGATGCTACTTCTAAAGCGTTTTGTGCCTCGTCAGCACACAAACCTTCTCCCAGTGGAAACTGGAAGCTTTGGCCTTTCTCTTTCACGAGATCAAGTTCTGAAAAGGTGGTGGTGCCTACTGTTGATGACAAAGTAACTAATGCTTCAGAGAGTTCAATCAACAAAGATTCAGGCAAAAATGAGCTCAAACCCAAGCTAATGAAAAAGAAGGTCAGGGTAAAGACACCAACAGCTGAACAGCTGGCATCCTTGAATCTAAAGGAAGGGAGGAACACCGTAACCTTCACCTTCAGTTTCTCTATGGATACGCTGGAGAATGAACAGATTGATGCCCAAATATTTTTATGGAAATGGGACAATCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAAGTCAGACGTTCTAGGTCAGGTCATGCCTTTAGTTGGAGTAGACTGGTCCCAGACAGGTGTTGCACATTTATTCTCAGCTATCAAGGAAAATGGCTACAAACTACTTTTTCTTAGTGCTCGATCAATTTCTCAGGCCTATCAAACCAGACAATTCCTGGTTAATCTTAAGCAGGTGATGATGTTTAGAAGTCAGACATCGGATATCAAGGCACTTTTTCCTCCTGAAAGCAACCCATTTTATGCTGGCTTTGGAAATAGAGATACTGATGAGATCAGCTACCTCAAAGTTGGAATCCCAAGAGGGAAAATCTTCATTATTAATCCAAAGGGAGAGATTGTTGTGAACCGCCAACATGACACAAAATCTTATCCTTCGCTTCATACCCTCGTGAATGGGATGTTCCCTCCTGCTACGAATACGAACACATCTGAGCAGGAGGATTTTAATTCATGGAATTACTGGAAGGTGCCACTTCAAGAATTACTTAGGTGA 2328 0.4248 MQVVGRLGSYISRGVSTVSGTVRPLGGAVDIVLVEQQDGSFKSSPWYVRFGKSHGVLRTEERMISINVNGEEANFHMYMDHKGQAFFLREVEAEEGESTLYPLSSGDETDILDKRHLKSRSFSFEDKSDYMAQGYMDTGNMLARTTSDGSMTSGLFIADNNFQREVLNADTNNARSLECAELAANLLEVKWSTNLAGHKPPRKDRVKFRKRKPQHDNMENSSDQRRFYDEACSLYVQDGICSNPDLEVPGGLDEDNGICSSCSSTSVEVSFSKQKTEVITELPMSGDIAEHTDGVQPLVYSEMSKSSIGCMHCTTEQTHEVFYLDNKIGEVHTHAEILQAAAVLPEVTKKEEVTKNADVMMPVMMVSKTSQQANCAHPGISKSTVEDIEDQTALPKIQTINLDIGLCSAEKDGSKCVAATPQDSACNILKHPSFGKDDMKCLKPDDQLLPEESGLYSIKADQAGMISVCKHLLYEGMGADATSKAFCASSAHKPSPSGNWKLWPFSFTRSSSEKVVVPTVDDKVTNASESSINKDSGKNELKPKLMKKKVRVKTPTAEQLASLNLKEGRNTVTFTFSFSMDTLENEQIDAQIFLWKWDNRIVISDVDGTITKSDVLGQVMPLVGVDWSQTGVAHLFSAIKENGYKLLFLSARSISQAYQTRQFLVNLKQVMMFRSQTSDIKALFPPESNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEIVVNRQHDTKSYPSLHTLVNGMFPPATNTNTSEQEDFNSWNYWKVPLQELLR 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0891 775 Pfam LNS2 (Lipin/Ned1/Smp2) 554 669 IPR013209 -
Lele28g0891 775 Pfam LNS2 (Lipin/Ned1/Smp2) 678 747 IPR013209 -
Lele28g0891 775 MobiDBLite consensus disorder prediction 197 221 - -
Lele28g0891 775 Pfam lipin, N-terminal conserved region 1 97 IPR007651 -
Lele28g0891 775 SMART lns2 601 727 IPR031315 -
Lele28g0891 775 PANTHER LIPIN 1 669 IPR026058 -
Lele28g0891 775 SUPERFAMILY HAD-like 594 714 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0891 Lele-ChrLele28 5749654 5755111 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0873 01 5041698 5044831 Lele28g0891 28 5749654 5755111 CCT
Lele03g0869 03 5063928 5067063 Lele28g0891 28 5749654 5755111 CCT
Lele25g0903 25 5771105 5777581 Lele28g0891 28 5749654 5755111 hybridization
Lele26g0909 26 5842400 5847919 Lele28g0891 28 5749654 5755111 hybridization