Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0887 ATGTCATTGGCAGTTCTGTCTAAAGAAAATAATGAAGCAGTAAACTTAATTGATAATCGTTCTTACGCTGAAACTCCAATCAACTCACTCAGTGATGGAAAGGGGGAATCTGGGACTCATTTGCAAGTGACTGAATCTTCTAAATTAGCAACTCCACAAGATACTCGTGATGGTCAGACTGTAGGAAAATATGGATTTCTTCCTGTGGATGATTCAGCGTCAACCTCAAATAGTGATGGAAAAGAGGAATCTACTATTCATATGCCAGTGCCTGAATCCTCCAAATTAGCAACACCACCAGATAATTGTGACAGTCAAACTGTAGGACAAGATGAACCAGCTTCAACTTCAATCAGTAATGGAAGAGAGGAATCTGGGACTAATTTGCTCGTTACTAAACTCTCAGAATTTTCTGTACCACAGAATGCTTCTGATGGTCAAAGTATAGGAAAAGATGAAATTCTTCCTGTAGATGGTTCAGCTTCAAAATCAAATGGTATGGTTGGCAAGACTGAAAGAAGCAACGATGGGACTGTGATTGAAAGTTCTAAACCAGATGTTGTAGAGAACATTTCTGACTTGCGGAAATCCCAAGATGGCTGTTCGACTCTCTCTGTTGACACTGATGTTGATAATCAAACTATCCACTCAGCTTCTACTTCTGCTCATGCTGTGCAGCCCAATGCTAAAAGAGGCCTTATTGATACAGCAGCCCCATTTGAATCTGTCAAGGAAGCTGTTTCCAAGTTTGGAAGAATTGTGGATTGGAAGGCTCATAGAATCCAGACTGTGGAGAGACGCAAGCTTGTTGAACAAGAACTTCAAAAGGCTTATGAGGAGATCCCTGAGCTCAGAAAACAGTCAGAGGCTGCTGAAGGGGAAAAAACACAAGTACTGACGGAGTTAGACAGCGCTAAGAGACTAATAGAAGAGATAAAACTCAACCTAGAGAGGGCACAAACCGAAGAGCATCAGGCACGACAAGATTCAGAACTTGCAAAACTTAGAGTGGAAGAGATGGAGCAGGGTATTGCAGATGAATCTAGCATTGCAGCCAAGGCGCAACTTGAGGTTGCTAAAGCTAGGCATGCAGCTGCTGTTTCAGACCTACAATCCGTCAAAGAGGAGCTGGATGTGCTGCGTAAGGAATATGCTTCTTTAGTGACTGAAAAGGATGTGGCTGTTAAGAAGGCTGAAGAGGCCGTTGCTGAATCTAAGGAAGTAGAGAAGACGGTGGAGGATTTGACTATTGAGCTGATTGCCACAAAGGAGTCATTGGAGTCTGCTCATGCGGCACACTTGGAAGCAGAGGAACAAAGAATAGGAACAGTCATGGCCAGAGATCAAGATTCTCTCAATTGGGGAAAAGAACTCAAACAGGCAGAAGAGGAACTCCAGAGACTAAACCAGAAAATTTTGTTTACAAAGGACCTGAAATCTAAACTGGACAATGCCTCTGCTTTGCTTCTTGATTTGAAAGCTGAATTAGCTTCATACATGGAAGCAAAATTAAAGCAGGAAGACAGTGAAGAAGGAATCTCAAAAGGAGACCCAGAGGAACCAGAGAAGAAGAATCACAATGAAATACAAGTAGCCGTAGCATTGGCGAAAAAGGAACTCGGGGAAGTAAAGATAAACATAGAGAAAGCAACTGCTGAGGTTAATTGCTTGAAAGTGGCTGCCGTATCATTAAAATCAGAACTTGAACGAGAGAAATCAGATCTTGCTAACATTGGGCAAAGAGAGGGGATGGCCTCCGTTGCAGTTGCATCTCTCAAGGCTGAATTGGACACGACTAGATCAGAAATAGCTTTGACCCAGATGAAAGAGAAAGAAGCCAGGGAGAGAATGATTGAGCTGCCCAAAAAACTACAACAAGCGGCTGAAGAAGCTAATCAGGCCAACTTGCTTGCCCAAGCAGCTCGTGAAGAGCTTCGGAAAGTGAAGGAGGAGGCAGAACAAGCTAAGGCTGGAGCAACTACCATGGAAAGTAGATTACTTGCAGCTCAAAAGGAGATAGAGGCTGCTAGGGCTTCTGAGAGGTTGGCGATAGCAGCAATTAAAGCATTGCAAGAGAGTGAATCAGCTAGAACCAACAATGAATCAGATTCAATTGCCGGCGTGACTCTTTCTTTAGAAGAGTACTATGAGCTTAGCAGACGGGCCCATGAGGCTGAAGAGCAAGCCGATATGAGGATTGCAGATGCTAATTCTCAAATTGCGATAGCTAGGGAGTCTGAATTGAAAACCCTGGAAAAATTATATGAAGCTAATAAGGAGATGCTTGCCAGAAGGGAATCCTTGAAGATAGCAATGGGTAAAGCTGAGAAAGCAAAGGAAGGGAAATTAGGCGTAGAACAAGAATTAAGAAAGTGGAGGGCTGAACATGAGCAACGAAGAAAGGCTGGTGGATTTGTTGACCAGGGAGTGGCAAACCAGAATAAAAGTCCAAGAGCTAGTGTGGAGGGCAATAAGGAAGCAAATAACTTGCACCGAGCTCCCAGTTCAGATAATCCTGAACATTACGTGTCAAGCCCAAATGATTATGCGCATGCAAACAACGCTGAAAATGGATCATTCCCAGATGCAAGGGTTGGGAAGAAGAAAAAGAAATCAATTTTACCACGGGTTTTAATGCTCTTTGCCAGGAGGAAATCACATACGACCAAGTCAGGGTAA 2679 0.4326 MSLAVLSKENNEAVNLIDNRSYAETPINSLSDGKGESGTHLQVTESSKLATPQDTRDGQTVGKYGFLPVDDSASTSNSDGKEESTIHMPVPESSKLATPPDNCDSQTVGQDEPASTSISNGREESGTNLLVTKLSEFSVPQNASDGQSIGKDEILPVDGSASKSNGMVGKTERSNDGTVIESSKPDVVENISDLRKSQDGCSTLSVDTDVDNQTIHSASTSAHAVQPNAKRGLIDTAAPFESVKEAVSKFGRIVDWKAHRIQTVERRKLVEQELQKAYEEIPELRKQSEAAEGEKTQVLTELDSAKRLIEEIKLNLERAQTEEHQARQDSELAKLRVEEMEQGIADESSIAAKAQLEVAKARHAAAVSDLQSVKEELDVLRKEYASLVTEKDVAVKKAEEAVAESKEVEKTVEDLTIELIATKESLESAHAAHLEAEEQRIGTVMARDQDSLNWGKELKQAEEELQRLNQKILFTKDLKSKLDNASALLLDLKAELASYMEAKLKQEDSEEGISKGDPEEPEKKNHNEIQVAVALAKKELGEVKINIEKATAEVNCLKVAAVSLKSELEREKSDLANIGQREGMASVAVASLKAELDTTRSEIALTQMKEKEARERMIELPKKLQQAAEEANQANLLAQAAREELRKVKEEAEQAKAGATTMESRLLAAQKEIEAARASERLAIAAIKALQESESARTNNESDSIAGVTLSLEEYYELSRRAHEAEEQADMRIADANSQIAIARESELKTLEKLYEANKEMLARRESLKIAMGKAEKAKEGKLGVEQELRKWRAEHEQRRKAGGFVDQGVANQNKSPRASVEGNKEANNLHRAPSSDNPEHYVSSPNDYAHANNAENGSFPDARVGKKKKKSILPRVLMLFARRKSHTTKSG 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0887 892 MobiDBLite consensus disorder prediction 98 125 - -
Lele28g0887 892 MobiDBLite consensus disorder prediction 164 180 - -
Lele28g0887 892 Pfam Weak chloroplast movement under blue light 231 799 IPR008545 -
Lele28g0887 892 Coils Coil 751 771 - -
Lele28g0887 892 MobiDBLite consensus disorder prediction 794 892 - -
Lele28g0887 892 Coils Coil 451 502 - -
Lele28g0887 892 Coils Coil 775 795 - -
Lele28g0887 892 Coils Coil 356 390 - -
Lele28g0887 892 MobiDBLite consensus disorder prediction 1 125 - -
Lele28g0887 892 MobiDBLite consensus disorder prediction 809 854 - -
Lele28g0887 892 Coils Coil 624 679 - -
Lele28g0887 892 MobiDBLite consensus disorder prediction 505 526 - -
Lele28g0887 892 Coils Coil 398 418 - -
Lele28g0887 892 Coils Coil 302 329 - -
Lele28g0887 892 MobiDBLite consensus disorder prediction 140 180 - -
Lele28g0887 892 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 232 862 - -
Lele28g0887 892 Coils Coil 267 294 - -
Lele28g0887 892 Coils Coil 533 567 - -
Lele28g0887 892 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0887 Lele-ChrLele28 5723233 5726609 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0898 25 5745443 5748503 Lele28g0887 28 5723233 5726609 hybridization
Lele26g0905 26 5806522 5810999 Lele28g0887 28 5723233 5726609 hybridization