Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0886 ATGGCCTTAGCAACAGGAAGGAGCTTCCCTTTGCAGCCATGCTCTTTATTTAAAAACGCGAGCATTAATAAATCTCCACCTGGTGGCACATCCTCGTGGGTCAGGCATGCTGGTGCAGAAATTACGAAGCCTTGTAGGCGAACTTATATTGCAGCTCAGCAGCGACCTACATGGCTCCCAGGGCCCGATCCTCCCACTTATCTTGATGGAACTCTGGCCGGAGATTTTGGGTTCGATCCACTTGGACTTGGAGAAGACCCGGCAAGCTTGAGATGGTATGTGCAAGCAGAGCTGGTTCACGCTCGCTTTGCAATGATTGGGGTCTCTGGAATTCTGCTGACACACTTCGCTTCGCGGGACTTGAGACGATACCAATTTGCTTTGTGGAAACAAAAAGGTACATGGATTTCGTTAGTCCAGGATCTCAAGCTAAAGCGGGATCCTTCTTTTGGACTGGAAGCTGCATTTGAAGGGCGTCTTTCTATGGTAGCAATGCTTGGAATCTTCATGCAAGCTTCAGTGACTCATGTTGGACCTATTGATAATCTTGTGGAACATGTTTCCGATCCATGGCACAAAACTATCGTTCAGATCATTGGCAGCTTATAG 609 0.4795 MALATGRSFPLQPCSLFKNASINKSPPGGTSSWVRHAGAEITKPCRRTYIAAQQRPTWLPGPDPPTYLDGTLAGDFGFDPLGLGEDPASLRWYVQAELVHARFAMIGVSGILLTHFASRDLRRYQFALWKQKGTWISLVQDLKLKRDPSFGLEAAFEGRLSMVAMLGIFMQASVTHVGPIDNLVEHVSDPWHKTIVQIIGSL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0886 202 Pfam Chlorophyll A-B binding protein 64 133 IPR022796 -
Lele28g0886 202 Gene3D Chlorophyll a/b binding protein domain 54 155 - -
Lele28g0886 202 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 37 148 IPR001344 GO:0009765|GO:0016020
Lele28g0886 202 Gene3D Chlorophyll a/b binding protein domain 156 201 - -
Lele28g0886 202 SUPERFAMILY Chlorophyll a-b binding protein 47 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0886 Lele-ChrLele28 5721025 5722612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0886 47 195 Chloroplast and Mitochondria Gene Families AT3G61470 33.333 3.10e-31 112