Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0878 ATGAACTTCGGAAACGACCATGGCGGCGGAAACGCCGGCGGAGGAAGGCCGCCGGCAAATTATCCGCTGACACGACAACCGTCAGTCTACTCCTTGACATTCGATGAGTTTGTCAATACTATGGGAGGTTCGGGAAAGGACTTTGGGTCGATGAACATGGATGAGTTGCTCAAGAACATCTGGAGTGCTGAAGAGGTTCAAACGATGGCTTCCTTGAGTGGTGTTCAACAGGTTGGAAGTGCCTCCGGTGGGCATTTGCAGAGACAAGGCTCCTTGACGTTGCCGCGAACACTCAGCCAGAAAACCGTGGACGAAGTTTGGAAGGATATTTCCAAGGACTATGGTGTTGTGGGGAAGGATGCTCCAAACGTGCCACAGAGGCAGCATACTTTGGGAGAGATGACGTTGGAAGAGTTTTTGGCGAGAGCCGGGGTTGTCAGAGAAGACGCACAAGCACAATTGATGGGAAAGCCAAATGATGGGGAGTTCCCCTATTTATCTCGTACTGGAAATAATAGTGCCGCAGGATTGGGTTTTCAGCAGATGAATAAGGGTACGGGCTTAATGGCAAACCAAATTACTGGGAATAATGACCAACTATCTATTCAGTCTCGTACCAATTTGCCATTGAATGTAAACGGTGCTAGATCTAATCAGCAACAGCTGCCGAATTCAAAGTCACCACAGCCCCAGATATTTCCTAAGCAGCCTGCCATGCCTTATGCGGGTCAGATACCATTAACGAGCAACACCCAGCTAGGTAATCAGGGAATGAGAGGTGGAATGGCTGGTATTGTGGATCAGGGTCTGAATGGTAAGCTGGTTCAGAGTTCTGCACTGCAAAGTGGAGGGATGGGTTTGGTTGGTTTAGGACCTGGGGCTGTTCGCGTAGCTACGGGGTCACCAGCTAATCAGCTGTCTTGCGATGAAATGGGAAAGAGTAATGATGACAATTCGTCAGTGTCGCCACTGCCTTATGCGTTCAATGGTGGCTTAAGAGGGAGGAAAAGCAGTGGGGCTGTGGAAAAGGTTATTGAGAGGAGGCAGAGGAGAATGATCAAGAATAGAGAGTCTGCTGCTAGGTCCCGGGCTCGCAAGCAGGCCTATACCATGGAATTGGAGGCAGAAGTTGCAAAGTTAAAAGAGGAGAATGAAGAACTTAGGAGGAAGCAGGCAGAAATCATGGAAATGCAAGAGAATCAAGTAAAGGAGATGACGGATATGCAACAAGGAGTTAAGAAAAGGTGCTTAAGACGAACACATACTGGACCATGGTAG 1278 0.4875 MNFGNDHGGGNAGGGRPPANYPLTRQPSVYSLTFDEFVNTMGGSGKDFGSMNMDELLKNIWSAEEVQTMASLSGVQQVGSASGGHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGVVGKDAPNVPQRQHTLGEMTLEEFLARAGVVREDAQAQLMGKPNDGEFPYLSRTGNNSAAGLGFQQMNKGTGLMANQITGNNDQLSIQSRTNLPLNVNGARSNQQQLPNSKSPQPQIFPKQPAMPYAGQIPLTSNTQLGNQGMRGGMAGIVDQGLNGKLVQSSALQSGGMGLVGLGPGAVRVATGSPANQLSCDEMGKSNDDNSSVSPLPYAFNGGLRGRKSSGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRRKQAEIMEMQENQVKEMTDMQQGVKKRCLRRTHTGPW 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0878 425 MobiDBLite consensus disorder prediction 1 24 - -
Lele28g0878 425 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 345 402 - -
Lele28g0878 425 SMART brlzneu 343 407 IPR004827 GO:0003700|GO:0006355
Lele28g0878 425 CDD bZIP_plant_BZIP46 347 398 - -
Lele28g0878 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 345 396 IPR004827 GO:0003700|GO:0006355
Lele28g0878 425 Pfam bZIP transcription factor 347 400 IPR004827 GO:0003700|GO:0006355
Lele28g0878 425 SUPERFAMILY Leucine zipper domain 347 396 IPR046347 GO:0003700|GO:0006355
Lele28g0878 425 Gene3D - 345 412 - -
Lele28g0878 425 MobiDBLite consensus disorder prediction 402 425 - -
Lele28g0878 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 350 365 IPR004827 GO:0003700|GO:0006355
Lele28g0878 425 Coils Coil 363 400 - -
Lele28g0878 425 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 425 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0878 Lele-ChrLele28 5672469 5675664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0878 22 425 bZIP Transcription Factor Family AT3G19290 45.872 1.88e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele28g0878 bZIP_1 4.6e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0887 25 5677317 5681464 Lele28g0878 28 5672469 5675664 hybridization
Lele26g0895 26 5741552 5746898 Lele28g0878 28 5672469 5675664 hybridization