Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0873 ATGAACAGCGAATACCTGTTTAATTCATCCACCTTGGACCACGACAATCAGATGGAGACGATGATGCAACTTCCTGAATTCTCTGGAGCTTACAGAAACGGCGGCGTTTCCGATGACTTTACACTGCATGAGCTCTCCCCTGCCGCTACTAGGACGACGGACACCGACATACAAGGAACTATGCTGCATTTTTTGGGCAACTCTCCTGTAACGTCCTCGTCGTCGTCATTAACAAGTTTACAGTCTCCTACAATTTCCTTTACTGACGCTACTCCGATGATTCAAGAGCGAGATCCAGCAGCTTGCGATAGAGCATCGGAGAAAGGGATGTCAATGGCGGCGATGAGGGAGATGATATTCAGGATAGCGGTGATGCAGCCGATACACATAGACCCCGAGTCGGTGAAACCACAGAAGCGGAGGAACGTGAAGATTTCGAAGGATCCTCAGAGCGTGGCGGCTCGCCACCGCAGAGAGAGGATCAGCGAGAGAATAAGGATTCTGAAGAGACTGGTTCCGGGAGGGACGAAGATGGACACAGCTTCCATGTTAGACGAAGCCATTCACTATGTAAAGTTTCTCAGGACTCAGGTTCAGTCAATGGAACGGGCTGCAGCGACTAAGCCTCCAGGGATAGGATTCCCTGTGTCAATGTCCACTGCATCTTCCACCTCGTATCTTCCTATTCCATCAAAGCCTCACCTATTTCCTACTCAAAATCTTCCTCATTTCGGAGATAAGGAATAA 747 0.4926 MNSEYLFNSSTLDHDNQMETMMQLPEFSGAYRNGGVSDDFTLHELSPAATRTTDTDIQGTMLHFLGNSPVTSSSSSLTSLQSPTISFTDATPMIQERDPAACDRASEKGMSMAAMREMIFRIAVMQPIHIDPESVKPQKRRNVKISKDPQSVAARHRRERISERIRILKRLVPGGTKMDTASMLDEAIHYVKFLRTQVQSMERAAATKPPGIGFPVSMSTASSTSYLPIPSKPHLFPTQNLPHFGDKE 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0873 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 205 IPR036638 GO:0046983
Lele28g0873 248 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 59 224 IPR045843 GO:0003700|GO:0006355
Lele28g0873 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Lele28g0873 248 MobiDBLite consensus disorder prediction 135 157 - -
Lele28g0873 248 FunFam BHLH transcription factor 148 210 - -
Lele28g0873 248 Pfam Helix-loop-helix DNA-binding domain 155 194 IPR011598 GO:0046983
Lele28g0873 248 SMART finulus 151 200 IPR011598 GO:0046983
Lele28g0873 248 Gene3D - 144 208 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0873 Lele-ChrLele28 5637757 5638503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0873 112 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 88.542 2.10e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele28g0873 HLH 7.8e-07 No_clan