Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0860 ATGGGAAGCATGAAGGTCCATCACTTGGCACGTGCACTCTGGGAGCACGAACCCTCTCCCTCCCTCTCCCTCGGCTGCAAACGCCTTCGTCCTCTCGCCCCCAAGCTACCCTCCTCCCCCACCTCTCCCAGCACTCCTCTCCCTCCCTTCGACCTCAAGACCTTCATCCGCCCCGACAGCGGCCCCCGAAAACCCTCTGACAACTCTCACAAAGAATTACCACCCCAGGTGGAAACGCACCAGGGAGGGACGAGATGGAATCCGACGCAGGAGCAGATAGGGATATTGGAGATGCTTTACCGAGGAGGGATGCGAACGCCGAATGCTCAGCAGATAGAGCAGATCACGGCTCAGCTTGGCAAGTATGGAAAGATTGAAGGCAAGAATGTCTTCTATTGGTTCCAAAACCACAAGGCACGCGAGAGGCAAAAGCAGAAACGCAATAGTCTCGGCCTCTCTCATCACAGTCCCAGATCTACTACCACTATGCCTTTTGACGCAAGGCTGGGTGAAGTAGTAGGGACGAGTGAGGAGCATAGTCCGTACAAGAAGAAGTGCAGGAACTGGACAGTTGAGAGCTTCCAAGAACAAAGCAGGTCGTTGTCGTCGTCGTCGTGTAAAGAGGAACAACAACACACAACTCTGGAGCTTTTCCCGTTGCACCCGGAAGGCAGATGA 678 0.5472 MGSMKVHHLARALWEHEPSPSLSLGCKRLRPLAPKLPSSPTSPSTPLPPFDLKTFIRPDSGPRKPSDNSHKELPPQVETHQGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHHSPRSTTTMPFDARLGEVVGTSEEHSPYKKKCRNWTVESFQEQSRSLSSSSCKEEQQHTTLELFPLHPEGR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0860 225 SMART HOX_1 81 148 IPR001356 GO:0003677
Lele28g0860 225 MobiDBLite consensus disorder prediction 57 74 - -
Lele28g0860 225 CDD homeodomain 84 145 IPR001356 GO:0003677
Lele28g0860 225 ProSiteProfiles 'Homeobox' domain profile. 79 144 IPR001356 GO:0003677
Lele28g0860 225 Gene3D - 83 150 - -
Lele28g0860 225 FunFam WUSCHEL-related homeobox 4 83 150 - -
Lele28g0860 225 MobiDBLite consensus disorder prediction 197 212 - -
Lele28g0860 225 Pfam Homeodomain 84 143 IPR001356 GO:0003677
Lele28g0860 225 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 225 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lele28g0860 225 SUPERFAMILY Homeodomain-like 76 149 IPR009057 -
Lele28g0860 225 MobiDBLite consensus disorder prediction 197 225 - -
Lele28g0860 225 MobiDBLite consensus disorder prediction 17 86 - -
Lele28g0860 225 MobiDBLite consensus disorder prediction 142 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0860 Lele-ChrLele28 5547804 5548685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0860 4 161 Wox Gene Family AT1G46480 67.647 3.63e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele28g0860 Homeodomain 5e-19 CL0123