Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0854 ATGCAAGCAGGGGAAGATTGTTGCGTCAAGGTTGCTGTCCATGTCCGACCGCTCATCAGTGATGAAAAGCTTCAGGGATGTAAAGATTGTGTCACCGTCTTCCCTGGGAAGCCTCAGGTGCAAATTGGTGCCCATTCCTTTACATTTGACCATATTTACGGGAGTACGGGTTCTCCTTCATCAGATATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGGTTTATTCCAAGGATATAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCGGGGAAAACATACACCATGGGCACTGGTTTTAAAGATGGTTGCCAAACAGGCATAATACCCCAAGTCATGAATGTTTTGTTCAGCAAAATTGAGACTTTAAAGCATCAGATTGAATTTCAGTTGAATGTTTCCTTCATTGAGATTCTTAAAGAAGAAGTACGAGACTTGCTGGATCCCTCTTCCATGAGCAAACAAGAAGCTGCTAATGGACATGCTGGAAAAGTGATGGTACCTGGGAAGCCTCCCATACAAATTCGTGAGACATCAAATGGTGTTATTACGCTAGCTGGATCTACTGAAGTAAGTGTTTCAACACTGAAAGAAATGGCTGCTTGCCTGGAACAAGGGTCATTGAGTAGAGCTACTGGGAGCACAAATATGAACAATCAATCCAGTCGTTCGCATGCCATCTTCACCATCACATTAGAGCAAATGCGTAAACTCAATGGTGCTATTCCTGGCGAGAACAGTTTAAATGGGTCCATGAATGACGAGTATCTTTGTGCTAAATTGCACCTTGTAGATCTTGCTGGCTCGGAACGAGCTAAAAGAACAGGCTCTGATGGTTTGCGTTTTAAGGAAGGAATTCATATTAACAAGGGCCTCCTGGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTCGGTGGCAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAACGCGGAGGAAACCCTCAACACTTTGAAGTATGCAAATCGTGCACGCAATATTCAAAATAAACCTGTTATCAACAGAGATCCCATTTCCAATGAGATGCTGAAAATGAGACAACAACTAGTGTATTTGCAAGCAGAACTTTGTGCTCGTTCTGGGGGTTCTTCAGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAGGATCTTTGCAGTGAACTTCACGAATACCGTAGTAAATGTTCTGTTGTAGAACAATGCAAAAAGGATACTCATGATGGCAGCACATGCATTGTTAAGACTGATGGGCTTAAGAGGAACTTTCCTATCATAGCATCTGATTATTCAATGAATGAAACAACAGGTGATTCAAGAGAAATTGAAGAAGTGGCGAAAGAATGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTACATGAGTTGAATAAACGCCTGGAGCAGAAAGAGTCTGAAATGAAACTTTTTGGAATGTCTGATGCTGAAGCACTCAAGCATCACTTTGGAAGGAAAATAATGGAGTTGGAGGATGAGAAGAGAGCTGTACAGCGAGAGAGGGATCATCTTTTAGCTGAGGTTGAAAATCTTTCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATGTCCATGCCCAAAAATTGAAATCACTTGAATCACAGATTCTGGATCTGAAGAAGAAACAAGAGAGCCAGGTCCAGCTTCTGAAGCAGAAGCAAAAAAGTGATGAAGCGGCAAAGAGACTGCAAGATGAGATACAATCTATAAAAGCCCAGAAGGTTCAATTGCAACAAAGGATTAAACAAGAGGCAGAACAATTTCGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTCCTGCAATTACGAAAGGAAGGAAGGAAAAATGAGTATGAAAGACACAAACTACAAGCTTTAAATCAGCGCCAGAAATTGGTCCTTCAAAGAAAGACTGAAGAAGCTGCCATGGCCACCAAGAGGCTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCAGCCGAGATACTTCAGCTACCATCAATGGAAGTGCAACAAATGGACAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAACTAGAAGTCATGATGAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCTCTTGCTGAAGAGTTAGCCATACTGAAGCAAGTGAATGAATTTGCTGCAAAGGGCCTCACTCCTCCAAGAGGAAAGAATGGTTTTGCTAGAGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGAATTGCTTCGCTTGAGAACATGTTGAGCATATCATCTAATTCACTAGTGGCAATGGCTTCTCAACTTTCTGAGGTTGAAGAACGAGAACGAGCCTTCACTAATCGTGGACGCTGGAACCAATTGCGTTCAATGGGAGAATCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGCAGATGCAAGATGCCAGCTGTGGGAGAGAGATATGGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGCCTATTACGGCAGAGTGAGATGAAGCGAAAGGAAGTTGAGAAGGAGCTGAAATTGAGAGATCAAACTTTTGCGACCACGTTGGCTACACCAGCTTCAGGAAACTCACCAAATTCATTGAAACACGACGGCCAAGATATGAATGGATCATTATCTCCTGCATCTGTGCCAGTACCGAAACAGCTCAAGTATACCCCAGGAGTTGTTAACGGCATAGGGGGGGATTCTGCGGCATTTATAAATCAGAGTAGAAAGATGGTACCCATGAGGCAACTATCAATGAAAAAACTCGCAATCGTAGGACAAGCTTCGGGAAAGTTATGGAGGTGGAAAAGAAGTCATCACCAATGGTTAGTACAATTCAAGTGGAAGTGGCAAAAGCCCTGGAGGCTTTCAGAATGGATTCGCCACAGTGATGAGACAGTTATGAGAGCAAGGCCACGGCCACAGGCTTTGACACACACAGGACTTTGGAAAGAGCACAACATTAGGTACAGTGTAACATACGAATATTAG 3138 0.4289 MQAGEDCCVKVAVHVRPLISDEKLQGCKDCVTVFPGKPQVQIGAHSFTFDHIYGSTGSPSSDMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIETLKHQIEFQLNVSFIEILKEEVRDLLDPSSMSKQEAANGHAGKVMVPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNGAIPGENSLNGSMNDEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPISNEMLKMRQQLVYLQAELCARSGGSSEEVQVLKERIAWLEAANEDLCSELHEYRSKCSVVEQCKKDTHDGSTCIVKTDGLKRNFPIIASDYSMNETTGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGMSDAEALKHHFGRKIMELEDEKRAVQRERDHLLAEVENLSANSDGQTQKLEDVHAQKLKSLESQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLEARKSSSRDTSATINGSATNGQSNEKSLQRWLDHELEVMMKEHEVRFEYEKQSQVRAALAEELAILKQVNEFAAKGLTPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEVEERERAFTNRGRWNQLRSMGESKNLLQYMFNSVADARCQLWERDMEIREMKDQIKELVGLLRQSEMKRKEVEKELKLRDQTFATTLATPASGNSPNSLKHDGQDMNGSLSPASVPVPKQLKYTPGVVNGIGGDSAAFINQSRKMVPMRQLSMKKLAIVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETVMRARPRPQALTHTGLWKEHNIRYSVTYEY 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0854 1045 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele28g0854 1045 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele28g0854 1045 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele28g0854 1045 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele28g0854 1045 MobiDBLite consensus disorder prediction 899 929 - -
Lele28g0854 1045 MobiDBLite consensus disorder prediction 692 718 - -
Lele28g0854 1045 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele28g0854 1045 CDD KISc_KIF4 7 366 - -
Lele28g0854 1045 Coils Coil 492 512 - -
Lele28g0854 1045 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lele28g0854 1045 MobiDBLite consensus disorder prediction 697 718 - -
Lele28g0854 1045 Pfam Kinesin motor domain 37 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele28g0854 1045 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Lele28g0854 1045 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele28g0854 1045 Coils Coil 863 890 - -
Lele28g0854 1045 Coils Coil 592 640 - -
Lele28g0854 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Lele28g0854 1045 Coils Coil 673 693 - -
Lele28g0854 1045 MobiDBLite consensus disorder prediction 899 931 - -
Lele28g0854 1045 Gene3D Kinesin motor domain 1 393 IPR036961 -
Lele28g0854 1045 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1023 - -
Lele28g0854 1045 Coils Coil 525 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0854 Lele-ChrLele28 5493844 5505063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0854 49 389 Calmodulin-binding Proteins AT5G65930 35.191 3.55e-53 201