Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0851 ATGGCTGTTGAGCTTATATCGGGTTATGGGGATGATAGTTTTGCAGGCCGGACAAAAGTAGACAACACGATCGCGGTGCAGGAAGCTACGGCAGCGGCCATTCATAGCGTCGAGAAGCTCATGACAATAATTTCTCAGCAGCGCCAGCACCAAGAGGAGGAGGCTTCTAGCTCCCGTGGAGGGCCTTCGGAACTGGAAGTTCTGGCAGATACGGCAATGAACAAGTTCAAAAGGGTCATTTCTCTCTTGGATAGGCCAAGAATCGGCCATGCTCGTTTCAGAAGAGCTCCTACGACGCAGGCTTCGATTCCTTTTGTCCAGCCGCAGCAGCCGCCGGATTCCGAAACCCCAGTGCCTCCTGTTACAGAACGCCAACAGATCAAAACAGAACAACCCTCTGCTTTTAAGGTCTATTGCCCTACGCCTGTTTTACGTCTCCCGCCTCTGCCTCACCAGGCGCACCAACCTTCCCCCTGTCATCGGGTGGAGAAGAAAGAGGCGAACGGCAGTGTCCAATTTTCGGCGTCGCCAACAGTTTCCGTCGCCACTTCGTATATGTCTGCGTTAACAGGGGATACTGATAGTATGCAACGCTCTTGTCATTCTTCGGGTTTTCAAATCATCCACAGTCAGAGATCACAGCAGGGATCCTACATGGGCAAGCCACCTTTGTGTTCGAGTTCTTTAAAGAGGAAGTGCAATTCAATGGATGATGCGGGTCTCAAGTGCGGATCATCCTCTGGTCGATGCCATTGCTCCAAGAAAAGGAGATCAAAGATAAGGAGAGTGATCAGAGTACCAGCAATCAGCTCAAAGATGGCTGATATTCCGGCTGATGAATATTTGTGGAGAAAATATGGACAAAAGCCCATCAAGGGTTCTCCTCACCCAAGGGGTTATTACAAGTGTAGCAGCGTGAGAGGCTGCCCCGCTCGCAAACACGTGGAGCGTGCTCTGGACGATTCCAGCATGCTCATTGTCACCTACGAAGCTGATCATAATCACTCGCTTGAGGTTGCAGCCGCCGTCGTCCTCGAATCATCGTAG 1047 0.5129 MAVELISGYGDDSFAGRTKVDNTIAVQEATAAAIHSVEKLMTIISQQRQHQEEEASSSRGGPSELEVLADTAMNKFKRVISLLDRPRIGHARFRRAPTTQASIPFVQPQQPPDSETPVPPVTERQQIKTEQPSAFKVYCPTPVLRLPPLPHQAHQPSPCHRVEKKEANGSVQFSASPTVSVATSYMSALTGDTDSMQRSCHSSGFQIIHSQRSQQGSYMGKPPLCSSSLKRKCNSMDDAGLKCGSSSGRCHCSKKRRSKIRRVIRVPAISSKMADIPADEYLWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDSSMLIVTYEADHNHSLEVAAAVVLESS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0851 348 Pfam WRKY DNA -binding domain 279 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g0851 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 26 338 IPR044810 GO:0003700
Lele28g0851 348 ProSiteProfiles WRKY domain profile. 272 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g0851 348 MobiDBLite consensus disorder prediction 102 126 - -
Lele28g0851 348 FunFam WRKY transcription factor 65 261 338 - -
Lele28g0851 348 SMART WRKY_cls 277 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g0851 348 Pfam Plant zinc cluster domain 230 275 IPR018872 -
Lele28g0851 348 SUPERFAMILY WRKY DNA-binding domain 275 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g0851 348 MobiDBLite consensus disorder prediction 45 64 - -
Lele28g0851 348 Gene3D WRKY domain 264 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0851 Lele-ChrLele28 5472758 5474065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0851 1 298 WRKY Transcription Factor Family AT4G24240 43.519 1.82e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele28g0851 WRKY 2.1e-24 CL0274