Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0844 ATGCATATCTTAGTCGTCTTCCTCCTTTCTTCTGCACTGTGCATCCCTTCTCCGTGTTCATCTGCAGCGACAGATACCCTCCGACAAGGCTCGTCTCTTTCAGTTGAGAAACCAACCGATACACTCGTGTCAGCCAATGGCGTCTTCTCCGCTGGATTCTTTCAAGTGGGCGACAATGCTTTCTGCTTTTCCATATGGTTCACAAAGTCCAAGCAACCCACCCTTGTCTGGACTGCAAATCGAGACCAACCCGTTAATGGCAAGGCTTCAAAGTTTGCACTTTCGAAACGTGGCAACCTCATTTTGAGTGATGCAGGAGCAACTACCATTTGGACCACAGAGACCTTCTCCTCTTCGCAAGTGTATCTCATACTCATGGACAACGGCAATCTCGTCCTTCGCACCTTGCACTCGCAAGGCATTGTTTTATGGCAAAGTTTTGACTCCCCAACAGATACCCTTCTTCCTGGTCAACCACTCACCGAGAAAGTGAGCCTCATTTCATCCAGAAGCACCACCAACTTCTCTTCTGGTTTGTATAGGCTTTACTTCGACAACGATAATGTTCTCCGGCTTCTTTTCAAAGGCCCTAACCTTTCTAGCGTGTACTGGCCTCCCACGTGGATACTGCCCGTTGATGAAGGCAGGTCCACCTACAACATAACTAAAACTGCAGTGCTAGATCCCTTTGGCCATTTCACGTCCTCTGATACTTTCCAATTCTATGCATCTGATTATGGCATTAAACGCTATAGGCGATTCGTGGTGGATCCTGATGGTAACTTGCGTCTCTATAGCTTCGAAGAAGAAACTAGAAAGTGGGAGGTCTCATGGCAAGTCTTAACCGAACCTTGTACCGTTCATGGTATTTGTGGAGCAAACAGCATGTGCACTTACGATCCTTTCGTAGGAAGGACCTGTTATTGCTTGCAAGGATTCAAGATTAAGAATCCCAACGACTGGACACAGGGATGTGAACCTGAATTCACAACCCCTCGTTGCAATTCCGCAGAGTTTGGTTTTGTCCGTCTTCCCAGCATGGAATTTTTCGGCTATGACTTGGAGGTAAACAGTGTAACAAACTTGGCACAATGTGAAAATAGGTGCTTGGAACTTTGTGATGATTGCAAAGGCGTTCAACTCAAATTCAACGAAGTTAGTACTTACAATTGCTACATCAAAACAATGTTGCTCAATGGACGGGATTCCCCTAATTTCGATGGAGATATCTATCTCAAATTGCCAAAGTCAACAATGCTTTCCCTCAAAGTTCCTCAGAAACATGTACCTTTGAAGTGCTCAGCCAATCTATTTCAGAGCTTGGATAGAACTTACCAAGATCCCAAAAAGAGTGCGTGGTTAAACTTTTTGCTTTGGTTCGCTTGTGGGATTGGAGCGCTCGAGATTACCTGCATTTTCTTCGTATGGTTCTTCTTGTTTAGGAGCAGTAAAGAAAACGATAAAGGAGAAAGACAGCAACTAGTTTCTGCTACAGGGTTCCAAAGGTTCACCTATTCAGAGCTCAAAAAGGCCACACGTGGATTCAGCGATGAGGTTGGAAGAGGAGCAGGAGGGATCGTGTACAAAGGGACATTAGACAATAATCGTGTGGCGGCAATCAAGTTCCTTATTAGCGAAACTAATCAAGGAGAAGCAGAGTTTCTGGCAGAAATTAGCACGATTGGGATGATGAACCACATGAATCTGATAGACATGTGGGGATACTGCGTGGAGGGGAAGCACAGACTGTTAGTGTACGAGTACATGGAACATGGATCCTTAGCAGAGAATCTCTATTCCAAAGCACTTGACTGGAACAAAAGATTCAATATTGCGGTTGGGACAGCCAAAGGTTTAGCTTATTTGCACGAAGAATGCTTGGAATGGATTCTGCATTGCGATGTGAAGCCTCAAAACATACTCTTAGATTCAGATTTCCAACCCAAAGTAGCTGACTTTGGCTTGTCGAAGCTTCTTAATAGGGATGAACGCGAAAATTCTGGTTTTTCAAGAATACGAGGGACGAGAGGGTACATGGCTCCGGAATGGGTGTACAATCTACGAATTACTTCGAAAGTGGACGTATATAGCTATGGGATTGTGGTGTTGGAAATGATAACTGGGAAAAGTCCAATGGGAGTCCATAGCTTGGAAAATAAAGGAGGGATAGATCAACGGAGGTTGGTGACGTGGGTGAAGGAGAAGTTGAATGGAGCTCCGGCGAGGGAGAGTTGGATTGAGGAAATAGCAGATCCGAATATGGAAGCAAAATACGACGCAGCCAAGGTAGAGTTGTTGGTCAAAGTGGCTTTGCAGTGTGTGGAAGATGACATGGATGCGAGGCCCTCCATGAGCCAAGTGGTGGAGATGCTTCAGTTTCCAGAATATAGATCCTTCCAATAA 2403 0.4515 MHILVVFLLSSALCIPSPCSSAATDTLRQGSSLSVEKPTDTLVSANGVFSAGFFQVGDNAFCFSIWFTKSKQPTLVWTANRDQPVNGKASKFALSKRGNLILSDAGATTIWTTETFSSSQVYLILMDNGNLVLRTLHSQGIVLWQSFDSPTDTLLPGQPLTEKVSLISSRSTTNFSSGLYRLYFDNDNVLRLLFKGPNLSSVYWPPTWILPVDEGRSTYNITKTAVLDPFGHFTSSDTFQFYASDYGIKRYRRFVVDPDGNLRLYSFEEETRKWEVSWQVLTEPCTVHGICGANSMCTYDPFVGRTCYCLQGFKIKNPNDWTQGCEPEFTTPRCNSAEFGFVRLPSMEFFGYDLEVNSVTNLAQCENRCLELCDDCKGVQLKFNEVSTYNCYIKTMLLNGRDSPNFDGDIYLKLPKSTMLSLKVPQKHVPLKCSANLFQSLDRTYQDPKKSAWLNFLLWFACGIGALEITCIFFVWFFLFRSSKENDKGERQQLVSATGFQRFTYSELKKATRGFSDEVGRGAGGIVYKGTLDNNRVAAIKFLISETNQGEAEFLAEISTIGMMNHMNLIDMWGYCVEGKHRLLVYEYMEHGSLAENLYSKALDWNKRFNIAVGTAKGLAYLHEECLEWILHCDVKPQNILLDSDFQPKVADFGLSKLLNRDERENSGFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMITGKSPMGVHSLENKGGIDQRRLVTWVKEKLNGAPARESWIEEIADPNMEAKYDAAKVELLVKVALQCVEDDMDARPSMSQVVEMLQFPEYRSFQ 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0844 800 PANTHER OS07G0415500 PROTEIN 9 792 - -
Lele28g0844 800 FunFam Serine/threonine-protein kinase 589 798 - -
Lele28g0844 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Lele28g0844 800 Pfam D-mannose binding lectin 74 162 IPR001480 -
Lele28g0844 800 Pfam S-locus glycoprotein domain 247 316 IPR000858 GO:0048544
Lele28g0844 800 Gene3D Phosphorylase Kinase; domain 1 479 588 - -
Lele28g0844 800 PIRSF SRK 1 795 IPR024171 GO:0004674
Lele28g0844 800 SMART ntp_6 336 414 IPR003609 -
Lele28g0844 800 ProSiteProfiles Protein kinase domain profile. 513 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0844 800 CDD STKc_IRAK 519 792 - -
Lele28g0844 800 CDD B_lectin 41 150 IPR001480 -
Lele28g0844 800 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Lele28g0844 800 ProSiteProfiles PAN/Apple domain profile. 334 415 IPR003609 -
Lele28g0844 800 Gene3D Transferase(Phosphotransferase) domain 1 589 797 - -
Lele28g0844 800 CDD PAN_AP_plant 330 415 - -
Lele28g0844 800 SMART serkin_6 513 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0844 800 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Lele28g0844 800 FunFam S-receptor-like serine/threonine-protein kinase 482 588 - -
Lele28g0844 800 Pfam Protein kinase domain 517 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0844 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 205 IPR036426 -
Lele28g0844 800 SUPERFAMILY Protein kinase-like (PK-like) 492 794 IPR011009 -
Lele28g0844 800 Gene3D - 19 148 IPR036426 -
Lele28g0844 800 SMART blect_4 30 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0844 Lele-ChrLele28 5417136 5419538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0844 442 791 Receptor kinase-like Gene Family AT3G58690 35.946 3.36e-67 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele28g0844 Pkinase 3.9e-52 CL0016