Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0819 ATGGATCATTCACTCTCCAGCCTTCTCTGCCAAGAAAAACAACAAGGAGAAGAGGTGGTGGTGATGGAAGAAGATTTATACGTTCAGTTTGAGGATTCCAGTGTTTCTTCAGAGGATGATGAGTATGTGGAAGTTCTGATTGAGAAAGAGATCGGCTATGGGTTCGGAAGGGATGAATCTTTGTTGTTGAGTGATTGGATCAGAACTGCTCGCTTGTATGCCATCAATTGGATTTTCAAAACAAGAGCAACATTCGGCTTTCGCTTTCAAACGGCTTACTTGTCTGTCACATACTTCGACCGATTCATTTCTAGACGGTCCATTGATGTGATTGCATGTCTTTCTCTGGCTGCTAAGATGGAGGAGTGTGATGTTCCGGCTCTATCAGAGTTTCCTTCACAAGATTATAACTTTGAAGGCAAAGTGATTCAGAGAATGGAGCTTTTGGTTCTCTCCACATTGGAATGGAACATGAACTTCACTACTCCTTTTGCCTTTTTACCTTATTTCATCTCAAAGTTCTGCAACCAATCCTCACCACCACCTTATATTTCTTCGAACATTATGCAGCTCATCTTCACATTAATCACAGAGGTCAATTTGATGGATCAAAGGCCATCTGTGATAGCGGCGGCGGCTACTTTGGTGGCAATTGATCCTCATTTGACAAAAAATGCCGTAGAATTGAAGATGAGTTCAGTTTCTGAATATCGGAGGCTCGAAATTGAAAACATATTTCCGTGCTATGATCTAATCCAGAGATTATACAAGGAGAAAGCTGAAAGAGACAAGGTTATACATTCCTCGAGTCCTCCACCGCCGCCGCAGCCGATCGGATCGACGGCAATCGACAAGCTTGAGACTTCTGTAGTTACTTCTGCTGTAACGTCCAAGAGAAGAAGACTCACATTCACGGATCACGAAGAAGAAGAAGGTCGTGGCAAACATGACGGAAGTTAA 960 0.4292 MDHSLSSLLCQEKQQGEEVVVMEEDLYVQFEDSSVSSEDDEYVEVLIEKEIGYGFGRDESLLLSDWIRTARLYAINWIFKTRATFGFRFQTAYLSVTYFDRFISRRSIDVIACLSLAAKMEECDVPALSEFPSQDYNFEGKVIQRMELLVLSTLEWNMNFTTPFAFLPYFISKFCNQSSPPPYISSNIMQLIFTLITEVNLMDQRPSVIAAAATLVAIDPHLTKNAVELKMSSVSEYRRLEIENIFPCYDLIQRLYKEKAERDKVIHSSSPPPPPQPIGSTAIDKLETSVVTSAVTSKRRRLTFTDHEEEEGRGKHDGS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0819 319 SMART Cyclin_C_2 161 274 IPR004367 -
Lele28g0819 319 Pfam Cyclin, N-terminal domain 69 159 IPR006671 -
Lele28g0819 319 ProSitePatterns Cyclins signature. 71 102 IPR006671 -
Lele28g0819 319 PANTHER CYCLINS 35 258 IPR039361 -
Lele28g0819 319 MobiDBLite consensus disorder prediction 263 283 - -
Lele28g0819 319 Gene3D - 64 153 - -
Lele28g0819 319 SUPERFAMILY Cyclin-like 144 275 IPR036915 -
Lele28g0819 319 SMART cyclin_7 76 152 IPR013763 -
Lele28g0819 319 MobiDBLite consensus disorder prediction 300 319 - -
Lele28g0819 319 Pfam Cyclin, C-terminal domain 162 261 IPR004367 -
Lele28g0819 319 SUPERFAMILY Cyclin-like 36 159 IPR036915 -
Lele28g0819 319 MobiDBLite consensus disorder prediction 297 319 - -
Lele28g0819 319 Gene3D - 154 270 - -
Lele28g0819 319 CDD CYCLIN 71 151 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0819 Lele-ChrLele28 5271498 5272923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0819 4 237 Core Cell Cycle Gene Families AT4G37630 33.977 5.60e-35 126