Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0788 ATGTCTAATACGGGTCTCGGTCTCGGTCTCGGCCTCGGTCTTCACCAGCAGTCAGAGGATTGCCGCAGAGAAATCCCACACAAGAAACACGATGATCCGTACAAATGTGACCCGAAGCTGTACCCGTCTCTCACGTTAGGACCGCCTCCTGAAGATCAAGAGGTGAATGAACAGCTTCTTCCTGCCAAGACTGAATCTGTTCATTTCCGTGCAATTGCGTCTTCTTCTCCCAGCGCCGCCTCTTCCTTCTCCAATTCCTCCAGCATCAAGAGGGAGAATAAGGACTTTGTCGGCGACGAGCTTGATTTGGAAGTAGACAACAGGTCTAATAATCTTTCCAAGGTAGGCCTCGACGTAGACGAAGAAGACGGTAATCCCAGGAAGAAACTTAGGCTCACCAAAGAACAATCCGCTGTTTTAGAGGATAGCTTCAAAGAGCACTCCACTCTCAATCCAAAGCAGAAGCAAGAATTGGCGACGAAGTTAAACCTGCGTGCGAGACAAGTAGAGGTTTGGTTTCAAAACCGGAGAGCGAGGACAAAACTGAAACAAACGGAAGTTGACTGCGAGTTACTCAAGAAGTGCTGCGAAACGCTAACGGAAGAGAACAGGAGACTGCAAAAGGAGTTGCAAGAACTGAGATCAATGAAAACCACGTCGCAGGGACCCTTGTATATGCAGCTTCCGGCAGCCACCCTCACCTTATGCCCTTCTTGTGAGAGAATTTGCGGCGGAGGCGGTGGCACCACTGCCAACGGCTCTCCCGCCAACACCGCCTTCCTTATCGGATCAAAGGCCCATCACTTGTATAAAAGCAACTATCCGTTCACCCACTCATCCGCAGCTTGCTAG 852 0.5035 MSNTGLGLGLGLGLHQQSEDCRREIPHKKHDDPYKCDPKLYPSLTLGPPPEDQEVNEQLLPAKTESVHFRAIASSSPSAASSFSNSSSIKRENKDFVGDELDLEVDNRSNNLSKVGLDVDEEDGNPRKKLRLTKEQSAVLEDSFKEHSTLNPKQKQELATKLNLRARQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTEENRRLQKELQELRSMKTTSQGPLYMQLPAATLTLCPSCERICGGGGGTTANGSPANTAFLIGSKAHHLYKSNYPFTHSSAAC 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0788 283 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 7 256 - -
Lele28g0788 283 MobiDBLite consensus disorder prediction 1 60 - -
Lele28g0788 283 ProSitePatterns 'Homeobox' domain signature. 158 181 IPR017970 GO:0000981|GO:0006355
Lele28g0788 283 CDD homeodomain 126 184 IPR001356 GO:0003677
Lele28g0788 283 Pfam Homeodomain 127 181 IPR001356 GO:0003677
Lele28g0788 283 SUPERFAMILY Homeodomain-like 124 191 IPR009057 -
Lele28g0788 283 FunFam Homeobox-leucine zipper protein 18 113 188 - -
Lele28g0788 283 ProSiteProfiles 'Homeobox' domain profile. 123 183 IPR001356 GO:0003677
Lele28g0788 283 MobiDBLite consensus disorder prediction 115 134 - -
Lele28g0788 283 Coils Coil 189 219 - -
Lele28g0788 283 Pfam Homeobox associated leucine zipper 183 217 IPR003106 GO:0006355|GO:0043565
Lele28g0788 283 Gene3D - 120 188 - -
Lele28g0788 283 MobiDBLite consensus disorder prediction 17 37 - -
Lele28g0788 283 SMART halz 183 228 IPR003106 GO:0006355|GO:0043565
Lele28g0788 283 SMART HOX_1 125 187 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0788 Lele-ChrLele28 5024690 5025820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0788 120 283 Homeobox Transcription Factor Family AT2G22800 63.068 5.19e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele28g0788 Homeodomain 2.8e-17 CL0123