Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0784 ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAGTGTTAAGAGAGGCCCTTGGTCTCCCGAAGAAGACGCCACTCTCAGGTCTTATGTTCAAACTCATGGCACTGGTGGTAATTGGATCGCATTGCCCCTTAAAGCAGGACTTCGGAGATGGTCTGCCATAGCCTCTCAGCTTCCCGGTAGAACAGACAATGATGTGAAGAACTACTGGAACACCTAG 216 0.5046 MGRAPCCDKASVKRGPWSPEEDATLRSYVQTHGTGGNWIALPLKAGLRRWSAIASQLPGRTDNDVKNYWNT 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0784 71 Gene3D - 11 71 - -
Lele28g0784 71 PANTHER OS09G0431300 PROTEIN 49 71 - -
Lele28g0784 71 CDD SANT 16 71 IPR001005 -
Lele28g0784 71 Pfam Myb-like DNA-binding domain 14 71 IPR001005 -
Lele28g0784 71 SUPERFAMILY Homeodomain-like 8 71 IPR009057 -
Lele28g0784 71 ProSiteProfiles Myb-like domain profile. 9 71 IPR001005 -
Lele28g0784 71 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 71 IPR017930 -
Lele28g0784 71 SMART sant 13 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0784 Lele-ChrLele28 4986074 4986988 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0784 1 71 MYB Transcription Factor Family AT3G49690 51.351 3.09e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele28g0784 Myb_DNA-binding 1.4e-14 CL0123