Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0768 ATGGGCAGGAAATGCTCGTATTGTGGAAACCTTGGTCACAATTCAAGGACTTGTAATACTGTTCAGAGAGGTGGATTTGAAGGTGGCCTCAAGATCTTCGGAGTGCAATTTGATCCTTCACCTTCACCTTCACCTCTTCCTCCTCTTCCTCCTCCTTCGTCTTCACCTACTAATAATTACAGTTATGGCATCAAAAGAAGTTTCAGCTTGGACTGCTTGCCGTCTTCCCAGAACACCTTCATATCTACCACATCTTCCTCAGCTTCCTCTTCCTCCTCCTTATGCTCTCTGCTTGAACTCAACGACAATTCAGATCACAAAATGTCTGATTCTTATTTATCCGGCAGAACCACCCAAGAAACGAAGAACAAAGGAGTGCCATGGACGGAGGAGGAGCACCAGATATTTCTGATAGGGCTGAAGAAGCTTGGGAAGGGTGACTGGAGAGGCATCTCTAAGAATTATGTGACAACAAGAACACCAACCCAAGTGGCCAGCCATGCACAGAAATATTTCCTCCGTCAGAATCACTCCAATAAAAGAAAGCGCTATCAAACCCTCCTTGATGTGGAGGGACAAAATAATGACACAGTCGAACGAGTAACGAGTTCTTGCTTTTCTAGGCCCATTGAAGCTGCTGGGGCTTCTGATCAGACTATGAACATGGATACTCTAGGCATTGCTGGTGCTTCCTTTCCATCCCATGTTGATGTCTTAGGCGAGACTTCCAACAACGCCTTAGTGGCATTGATTCCGCGTAATTTGCCGGCGGGCACCGCAAGCTTGGCGCATTCCTTGAAATGCGAGGCTTAA 813 0.4662 MGRKCSYCGNLGHNSRTCNTVQRGGFEGGLKIFGVQFDPSPSPSPLPPLPPPSSSPTNNYSYGIKRSFSLDCLPSSQNTFISTTSSSASSSSSLCSLLELNDNSDHKMSDSYLSGRTTQETKNKGVPWTEEEHQIFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRQNHSNKRKRYQTLLDVEGQNNDTVERVTSSCFSRPIEAAGASDQTMNMDTLGIAGASFPSHVDVLGETSNNALVALIPRNLPAGTASLAHSLKCEA 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0768 270 Gene3D - 128 177 - -
Lele28g0768 270 SMART sant 124 174 IPR001005 -
Lele28g0768 270 CDD SANT 127 172 IPR001005 -
Lele28g0768 270 ProSiteProfiles Myb-like domain profile. 120 172 IPR001005 -
Lele28g0768 270 MobiDBLite consensus disorder prediction 40 55 - -
Lele28g0768 270 MobiDBLite consensus disorder prediction 37 60 - -
Lele28g0768 270 PANTHER TRANSCRIPTION FACTOR KUA1 3 211 - -
Lele28g0768 270 ProSiteProfiles SANT domain profile. 128 176 IPR017884 -
Lele28g0768 270 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 123 175 IPR006447 GO:0003677
Lele28g0768 270 Pfam Myb-like DNA-binding domain 127 172 IPR001005 -
Lele28g0768 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 124 176 IPR017930 -
Lele28g0768 270 SUPERFAMILY Homeodomain-like 122 176 IPR009057 -
Lele28g0768 270 FunFam transcription factor MYB1R1 126 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0768 Lele-ChrLele28 4901390 4903494 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele28g0768 Myb_DNA-binding 9.4e-12 CL0123