Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0766 ATGAACTCTATTCCGAGTATCATTATCGAGTCGACTCGGAATCTCCGCGGCTCTGCTATTTTCTTGTTATTCACAGTCGCCGCCGTCAAAGTTTCTCACATTCTTTACCGATATCTTCAACGAAATTCTAGATTTTCCCCCATGCTTTCTTCTTCGTCTTCGTTAAATGGCGACGAGGCTCTTCGACGAAATCGTATCCTCTCAAGCAAGCTCTACTTCGATGTCCCTCAGTCCAAGGTTCCACTTATCTACTCGAAGTCGTACAATATCGCGTTTCTGGGAATAGAGAAGTTGCACCCATTTGATTCATCTAAATGGGGAAATATTTGTCTACTCCTCGTTGCATCTGGAATGCTAGACAAAAATTGCTTTGTTGAGCCTCTGGAGGCTTCCAAGGATGATCTCCTAGTGGTACATTCAGAATCATACTTGAATATCCTGAAGAATAGTTCAAACGTTGCTATGATAATTGAGGTACCTCCAGTGGCATTATTTCCCAATTGTCTTCTGCAGCATAAAGTTCTCTTCCCATTTCGAAAGCAGGTTGGAGGGACTATATTAGCAGCAAAACTTGCAAAGGAAAGAGGATGGGCTATTAACGTAGGTGGAGGTTTCCATCATTGTTCAGCAGAAAAAGGAGGTGGATTTTGTGTGTATGCAGATATTTCTCTATGCATCCGCTTCGCTTTTGTCCAATTAAATATATCAAGGGTAATGATCATTGATCTTGATGCACACCAAGGAAATGGTCATGAAATGGACTTTGCCCATGACAGCCGAGTCTATATCCTGGATATGTACAACCCGGGAATATATCCCTTTGATTATGAGGCCAGAAGATACATAGATCAGATAGTTGAAGTGAAGAGTGGGACACATACAGAGGATTACCTACAGAAATTAGACAGAGCACTTGAGATTGCTGGGCATAGGTTTAATCCTGAGTTGGTAGTTTATAATGCTGGAACTGACATTCTGGACGGTGATCCATTGGGCAGGTTGAAGATCAGTCCTGAAGGAATTGTTTTTCGAGATGAAAAAGTTTTCCAATTTGCTCGTAAGAAGAAGGTTCCAATTGTCATGCTCACATCAGGTGGTTACATGAAGTCCAGTGCTCGAGTCATTGCAGATTCTATAGTCAATCTCTTTAATAGATGTTTGATCGATATTAGACAAAGTTCAAAGTGA 1188 0.4133 MNSIPSIIIESTRNLRGSAIFLLFTVAAVKVSHILYRYLQRNSRFSPMLSSSSSLNGDEALRRNRILSSKLYFDVPQSKVPLIYSKSYNIAFLGIEKLHPFDSSKWGNICLLLVASGMLDKNCFVEPLEASKDDLLVVHSESYLNILKNSSNVAMIIEVPPVALFPNCLLQHKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAEKGGGFCVYADISLCIRFAFVQLNISRVMIIDLDAHQGNGHEMDFAHDSRVYILDMYNPGIYPFDYEARRYIDQIVEVKSGTHTEDYLQKLDRALEIAGHRFNPELVVYNAGTDILDGDPLGRLKISPEGIVFRDEKVFQFARKKKVPIVMLTSGGYMKSSARVIADSIVNLFNRCLIDIRQSSK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0766 395 FunFam Histone deacetylase 11 80 389 - -
Lele28g0766 395 PRINTS Histone deacetylase superfamily signature 314 324 IPR000286 -
Lele28g0766 395 PRINTS Histone deacetylase superfamily signature 237 252 IPR000286 -
Lele28g0766 395 PRINTS Histone deacetylase superfamily signature 203 226 IPR000286 -
Lele28g0766 395 PANTHER HISTONE DEACETYLASE 2-RELATED 89 382 - -
Lele28g0766 395 Pfam Histone deacetylase domain 99 381 IPR023801 -
Lele28g0766 395 SUPERFAMILY Arginase/deacetylase 77 385 IPR023696 -
Lele28g0766 395 CDD HDAC_classIV 99 382 IPR044150 GO:0004407|GO:0016575
Lele28g0766 395 Gene3D Histone deacetylase domain 79 393 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0766 Lele-ChrLele28 4878758 4883065 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0779 26 4959070 4971857 Lele28g0766 28 4878758 4883065 hybridization