Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0765 ATGTCCAAAATGAAGCATCTACTGCGAAAGCTTCATATAGGTGGTGGGATCAATGAACCCCACAGGTTGCCTGATACCCGCCCGGTGATCACTCCCAGTTCCGCCCCTAACCTCGCATCATCTTCGTCGACGTTGGCATCGAATACAGTGGGCACAGTCCGGCCAAATGAATCGGTTGCTGATCGGATGGATATTTATGGAGCTGGTGCTATATGTGGCGACAAGGGAGCCGATTTTAGTTTATTGGAGGAGGAGTTTCAATTGCAGTTGGCTTTAGCTATTAGCGCTTCCGATCCTGATGTCCGCAAGGACCCTGAGTCTGCCCAGATCGACGCCGCGAAGCAGATGAGCCTCGGTTCAGCGGCTTGCGTCACCGACACGGAAGCCATCGTCCAGTTTCAATCGCTTCGTTATTGGAACTATAATGTCATTGATTATGAGGAGAAATTGATGGATGGATTTTATGATTTATATGGATTCTCCTCAAATTTGACCGAACGAGGAAAGATGCCGTTGTTGGTGGATCTGCAAACTGCTTCCCTCTCTGAAAATGTTGGTTGTGAAGTGATTTTGGTGAATCGTATGGTTGATATTAAGCTGAAACAGCTTGAGAAAAAAGCCTTTGCTGTATCCAAGGACTGTTGCTTATCTGAACAAGGGCTAGTTTCAAGTGGCTTGCTTCAGAAACTTGCTGATATTGTTGTTAATAGAATGGGTGGACCAGTTGGTGACCCTGATGAGATGTTGAAACAGTGGTCAGCAAGGAGTCATGATTTACGTGATTCTTTGAGGGCAATTGTTATTCCCCTTGGCTGTCTTGATGTTGGACTTTCTCGCCATCGAGCCCTACTTTTTAAGGTGATGGCTGATAGGATTAATGTTCCCTGCATGCTGGTCAAAGGGAGCTATTACACTGGAACTGACGATGGAGCTGTGAATTTGATTAGAGCTGATGATGGAAGTGAATACATTATTGATTTGATGGGTGCACCTGGTGCTCTTATTCCTACCGAAGTACCCAGTAGTCAGCTCCAAAACTACAGTTTTCTTGGAACAGGTTGTGCTGAGATTGTAGAATTACCTAACAATGCCCATCTCATACTTGATGGTGGAACTGGAGTGCTAGCAGTGTCATCTGATAATGATAGAACTTCAACAGTAGGCAGGACTCAATCCGAACAATTATTGAATTTGGACAGTCAAGGAACAATGGATGCAAGGAACCAAGGTGGAATAAATCAAACAGAAAGATTTGGACGTGATTTGGGAAACCTTTGTCAGTCTATGCATATATCATGTGAAAGCACATCACATACAGAAGCATCATATGCAGAAAAGATGCAAGTAAAAAATTTGTCGGAGTATTTCCTCAGTGTGGCAAAGAAGTCAGAATTTGCGCAAAAACTGCAAGCTGGCCCATTAGAGAGCAGTGCATTTCCCCTTCCTGATCTCTTTTCAGATATCAATCGACAAAATACAAGTGAAAATAAATTTTATGAACAGACTCATCAACTTGATGGAAAAATTGTTGTTGATGCTTTTCCATCTGATCCAAGCTTTGAGAAGTCCCTCATATCTTCTCAATGGGTGCGCTCAGCCCATGATGTTAGATTCTGTCAATCTGCTGATTTGTTAGCTAAACAGAAAGAAGAACTGGAGCAAAGTGATGCCACTGTTGCTCATACAGGTCCTGTCAATCTGCTAAAGATGCATGAAGAACAAGTTCTTGATTCTTACTTGACCAAGGCAGTTGTTTCTTGCAAGAGGAAAATTGAGGTTGACTCGGTCTATGATGATGCAAATGGTATTGATAATAAAGTTGGAGTGGCTTTTAATTGCAATCAATTTGGGAATGATTTTTCTATTCAACTTAAATCAGATAATCGAGATAGCAACCTAAATGATGGTAAAAGTGACAAAGTTAAGTCAGTACTGGGTGAGGGCGCCGAATGGGAAATTCAATGGGAGGATCTTCATATCGGTGAGCGTATTGGTATAGGTTCTTATGGTGAGGTTTACCATGCTGACTGGAAAGGCACTGAAGTTGCTGTGAAGAAGTTTCTGAACCAAGACTTTTCTGGTGATGCTTTGGCTCAGTTCAGATCCGAAGTTGAGATCATGTTGAGGCTGCGGCATCCAAATGTTGTACTTTTCATGGGAGCTATTACTCGGCCACCACATTTTTCTATATTGACAGAGTTCCTTACAGGAGGGAGTTTATATAGGTTATTGCATCGACCCAATTTTGAACTTGATGAGAAGAGGAGGTTGCAAATGGCTCTTGATGTGGCTAAGGGTATGAATTACTTGCACACAAGCCATCCTCCCATTGTTCATCGGGATTTGAAGTCTCCAAATCTTCTTGTTGACAAACATTGGGTTGTTAAGGTTTGTGATTTTGGTTTGTCACGTATGAAGCACAATACCTTTCTGTCCTCAAAATCTTCTGCGGGAACGCCCGAGTGGATGGCACCTGAAGTATTAAGAAATGAACCAGCCAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATTTTGTGGGAATTGGCTACTGCAAGGATCCCATGGAAAGGGTTGAACCCAATGCAGGTTGTTGGCGCTGTTGGATTCCAAAATAGACGGCTAGAAATTCCTGAAGATGTTGATCCAATGGTAGCACAAATAATACGCGACTGTTGGCAAATGGAGCCAAACTTGCGGCCATCATTCTCACAGCTTATGTCTCGCCTCCGCCATCTTCAACATCTTCTTGTGAAAGATAGGAGCTCAACGCAATAA 2778 0.4294 MSKMKHLLRKLHIGGGINEPHRLPDTRPVITPSSAPNLASSSSTLASNTVGTVRPNESVADRMDIYGAGAICGDKGADFSLLEEEFQLQLALAISASDPDVRKDPESAQIDAAKQMSLGSAACVTDTEAIVQFQSLRYWNYNVIDYEEKLMDGFYDLYGFSSNLTERGKMPLLVDLQTASLSENVGCEVILVNRMVDIKLKQLEKKAFAVSKDCCLSEQGLVSSGLLQKLADIVVNRMGGPVGDPDEMLKQWSARSHDLRDSLRAIVIPLGCLDVGLSRHRALLFKVMADRINVPCMLVKGSYYTGTDDGAVNLIRADDGSEYIIDLMGAPGALIPTEVPSSQLQNYSFLGTGCAEIVELPNNAHLILDGGTGVLAVSSDNDRTSTVGRTQSEQLLNLDSQGTMDARNQGGINQTERFGRDLGNLCQSMHISCESTSHTEASYAEKMQVKNLSEYFLSVAKKSEFAQKLQAGPLESSAFPLPDLFSDINRQNTSENKFYEQTHQLDGKIVVDAFPSDPSFEKSLISSQWVRSAHDVRFCQSADLLAKQKEELEQSDATVAHTGPVNLLKMHEEQVLDSYLTKAVVSCKRKIEVDSVYDDANGIDNKVGVAFNCNQFGNDFSIQLKSDNRDSNLNDGKSDKVKSVLGEGAEWEIQWEDLHIGERIGIGSYGEVYHADWKGTEVAVKKFLNQDFSGDALAQFRSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLTGGSLYRLLHRPNFELDEKRRLQMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHNTFLSSKSSAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATARIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPMVAQIIRDCWQMEPNLRPSFSQLMSRLRHLQHLLVKDRSSTQ 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0765 925 Gene3D Phosphorylase Kinase; domain 1 651 736 - -
Lele28g0765 925 MobiDBLite consensus disorder prediction 33 52 - -
Lele28g0765 925 Gene3D Transferase(Phosphotransferase) domain 1 737 921 - -
Lele28g0765 925 FunFam Serine/threonine-protein kinase isoform 1 649 736 - -
Lele28g0765 925 FunFam Serine/threonine-protein kinase CTR1 737 920 - -
Lele28g0765 925 PRINTS Tyrosine kinase catalytic domain signature 771 789 IPR001245 GO:0004672|GO:0006468
Lele28g0765 925 PRINTS Tyrosine kinase catalytic domain signature 818 828 IPR001245 GO:0004672|GO:0006468
Lele28g0765 925 PRINTS Tyrosine kinase catalytic domain signature 837 859 IPR001245 GO:0004672|GO:0006468
Lele28g0765 925 PRINTS Tyrosine kinase catalytic domain signature 732 745 IPR001245 GO:0004672|GO:0006468
Lele28g0765 925 PRINTS Tyrosine kinase catalytic domain signature 881 903 IPR001245 GO:0004672|GO:0006468
Lele28g0765 925 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 158 915 - -
Lele28g0765 925 SMART serkin_6 658 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0765 925 Pfam Protein tyrosine and serine/threonine kinase 658 910 IPR001245 GO:0004672|GO:0006468
Lele28g0765 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Lele28g0765 925 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Lele28g0765 925 Pfam Ethylene-responsive protein kinase Le-CTR1 132 335 - -
Lele28g0765 925 ProSiteProfiles Protein kinase domain profile. 658 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0765 925 SUPERFAMILY Protein kinase-like (PK-like) 648 909 IPR011009 -
Lele28g0765 925 CDD STKc_MAP3K-like 664 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0765 Lele-ChrLele28 4867290 4873768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0765 1 924 MAP Kinase Kinase Kinase AT5G11850 53.674 0.0 945
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele28g0765 PK_Tyr_Ser-Thr 3.4e-66 CL0016