Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0754 ATGGGGGTTGTCGAGTGGTTGGTGGCTGGTGTTTCATCGGCTTCGACGCCCATGACGGTGGTCGCCATGGTGGTGGGAGTGTTGTGTTATTTGTACGGACCGTACTGGGGAGTGAGGAAGGTTCCAGGCCCACCAGCCGTTCCACTGTTAGGGCACCTTCCCTTGCTTGCTAAGTATGGCCCTGATCTCTTCTCTCTCCTCGCCAAGCAGTATGGCCCAATCTACAGATTTCATATGGGAAGACAACCCCTGATAATTATAGCAGACCCAGAGCTGTGTAAAGAGGCCGGCATCAAAAAATTCAAGGATCTTCGAAACAGAAGCATTCCTTCCCCTATTTCGGCTTCACCTCTTCACCAAAAGGGTCTCTTTTTCACCAAGGATTCGAGATGGACCATCATGAGAAACACGATTCTGTCACTTTACCAGCCATCACACTTGGCCAACTTAGTGCCCATGATGCAGTCGTACATAGAATCGGCAACCCAGAATCTTGATTCCTGCAAAGAAGACATAAGCTTCTCTAATCTCTCACTCCGGTTGGCTTCTGATGTAATTGGGGAAGCGGCTTTTGGCGTCAACTTTGGACTCTCAAAGCCTCATTTAGCGTGTGATTCAATGAAGACAGTTAGTGTTACAGGTGATTATGATGGAGTATCAGATTTCATCAACGAACACATATACTCCACCACACAACTCAAGATGGACTTGTCGGGTTCCTTCTCCATCATACTTGGTCTTCTTGTCCCCGCACTCCAAGAGCCGTTCCGGCAGATTCTGAAGAGAATTCCTGGCACTATGGATTGGAAAATCGATCGTACCAACAAGATCTTGAGCGGCCGTCTTGATGAGATTGTGGAGGAGAGAATTAAAAACAGAGACCCGAGTTCTAAGGACTTCTTGTCCCTCATATTAAATGCCAGAGAATCAAAATCAGTACCAGACAATATTTTCACCCCAGACTATGTTAGTGCTGTCACCTACGAACACCTTCTAGCTGGTTCGGCGACCACATCTTTTACTCTGTCTTCCATTATGTACTTGGTTTCTGAGCATCCGGAAGTAGAGAAAAAGTTGCTTGCAGAGATCGATGCATTTGGCCCACCTCATCAAAAACCCACGCCTAATGATCTTCATGACAAATTTCCTTATCTTGATCAGGTGGTTAAAGAGGCAATGAGGTACTACACCGTCTCCCCACTAGTTGCAAGAGAAACAGCAAATCAAGTAGAAATAGGAGGTTACCTTCTCCCTAAGGGGACATGGGTGTGGTTAGCGCCTGGAGTTCTGGCTAAAGATCCAAATAACTTTCCGGAGCCAGAAAAGTTCAAGCCCGAGAGGTTTGATCCGAACTGTGAAGAATCCAGACGAAGGCATCCTTACGCATTTATACCATTTGGAATTGGTCCTCGGGCCTGCATTGGCCAGAAATTTTCCATACAAGAGATCAAGCTTACCCTCATTCATTTATACCGCAAGTATGTCTTCCGTCACTCCCCAAACATGGAAAAACCCGTACTACTTGACTATGGCATTGTTCTTAACTTCAAGAATGGTGTCAAGCTCAGAGCCATTAATAGAACACAATGA 1590 0.4616 MGVVEWLVAGVSSASTPMTVVAMVVGVLCYLYGPYWGVRKVPGPPAVPLLGHLPLLAKYGPDLFSLLAKQYGPIYRFHMGRQPLIIIADPELCKEAGIKKFKDLRNRSIPSPISASPLHQKGLFFTKDSRWTIMRNTILSLYQPSHLANLVPMMQSYIESATQNLDSCKEDISFSNLSLRLASDVIGEAAFGVNFGLSKPHLACDSMKTVSVTGDYDGVSDFINEHIYSTTQLKMDLSGSFSIILGLLVPALQEPFRQILKRIPGTMDWKIDRTNKILSGRLDEIVEERIKNRDPSSKDFLSLILNARESKSVPDNIFTPDYVSAVTYEHLLAGSATTSFTLSSIMYLVSEHPEVEKKLLAEIDAFGPPHQKPTPNDLHDKFPYLDQVVKEAMRYYTVSPLVARETANQVEIGGYLLPKGTWVWLAPGVLAKDPNNFPEPEKFKPERFDPNCEESRRRHPYAFIPFGIGPRACIGQKFSIQEIKLTLIHLYRKYVFRHSPNMEKPVLLDYGIVLNFKNGVKLRAINRTQ 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0754 529 Pfam Cytochrome P450 42 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Lele28g0754 529 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 Gene3D Cytochrome P450 32 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 SUPERFAMILY Cytochrome P450 35 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g0754 529 PANTHER THROMBOXANE-A SYNTHASE 19 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0754 Lele-ChrLele28 4801227 4804138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0754 79 527 Cytochrome P450 AT2G26170 72.829 0.0 644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0771 01 4470160 4470723 Lele28g0754 28 4801227 4804138 CCT
Lele02g0748 02 4505877 4506440 Lele28g0754 28 4801227 4804138 CCT
Lele03g0765 03 4464878 4468351 Lele28g0754 28 4801227 4804138 CCT
Lele04g0766 04 4663881 4664444 Lele28g0754 28 4801227 4804138 CCT
Lele25g0759 25 4814700 4817690 Lele28g0754 28 4801227 4804138 hybridization
Lele26g0766 26 4879254 4882157 Lele28g0754 28 4801227 4804138 hybridization