Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0753 ATGAAGGTTTGCCAGGATTATACAAGTAAGATAGAACTTCCTGTAGTCTCCACCCATTTTTATGTTTCTTTGGTCCGCAGGTATTCTGTAATTATGGTTTACGTATGCTTATTTGGTGGTCTCAGAGGAAATGGAGCAAGTGTTATCCGGATTATTCCTTATGCTGCCTTGCATTTTATGACATATGAGCGGTACAAGTGTTGGATCTTGGAGAATTGTCCAACGTTAGGATCAGGTCCTGTTATTGACCTTTTAGCTGGATCCGCAGCTGGAGGCACTTCAACTTTGTGTACATATCCTCTAGACCTTGCCCGTACAAAACTGGCTTATCAGGTGGTAGACACAAGAGGAAGTATCAAAGGTGTCATGGAAGATGTTCATTCTCGATCTGCACATAATGGAATTAAAGGTGTTCTGACACGTGCCTACAAGGAAGGGGGAGTTCGTGGACTTTATAGAGGTGTAGCTCTTGCTGGCTTGTTTGGACAGACCTTAACGTACCCTATAGATGTTGTTAAGAGACAGATGCAGGTTGGCAGCCTGCAGAATTCAGCTCATGGTGATGTTAGATACAGGAATGCGTTTGAGGAACTTAGGATTATTGTTGCTAATCAAGGGTGGAGGCAGTTGTTCGCAGGCATGAGCATAAACTACATTAGGATTGTTCCATCAGCGGCGATTGGTTTCACTACATACGACATGATGAAGGCTTGGCTTGGCGTAGCACCCCAACAGAAGAGTGTTTGGGTTGCCTTTGCTGAAATTGTTCTCATGGAGTATGCCAGCCGCAGCAGGCTAGCAGGGATGGGTGCTTCTGGAAAATGGGTGAGATCATTAATCGGGCTCAGGAAGTCTGATAAGGATGACCATGCCAAGGAGGGTGGTGGCAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGACATGGCTTCCTGGAAAGGTTTCAGAGGAAACCACAGAGCTGCCTCGGAGGGTTCTGATTCTCCAGTTGCTAATGCTTTCACAGCTGCAATGGCCACAGTCATTCGAGCTCCCCCTAAGGATTTCAGACTTGTTAGGCAAGAATGGGCAGCAATCAGAATTCAAACTGCATTTCGCGGTTTCTTGGCAAGAAGGGCTTTAAGGGCCTTGAAAGGAGTGGTAAGGCTTCAAGCTCTTGTGAGAGGTCGACAAGTGAGGAAGCAAGCTGCAGTGACATTGAGGTGTATGCAGGCTCTGGTTCGTGTTCAAGCCCGAGTGAGGGCTCGTCGTGTTCGAATGTCCATAGAGGGCCAGGCCGTGCAAATGATTCTTAATGAACGTCGCACCAAGGATGATCTCTTGAAGCAAGCTGAGGAGGGATGGTGTGATAGCAAAGGAACTCTGGAAGAAGTCAAAGCTAAGCTTCAGATGAGACAGGAAGGAGCCTTCAAGAGAGAGCGAGTCATTGCATATTCTCTTGCTCAGAAGCAATGGAGATCAACCCCTTGTTCTAATGCACGAACAAACACGTCTCTCAAGAACTTTGAAATCGACAAATCTAACTGGGGATGGAATTGGTTGGAACGTTGGATGGCAGCCAAGCCCTGGGAAACTAGATTGATGGAACAATCACAGACCGATGCCTCTGAAAAAATTAAAACCCCACCTCCTAAGAAGTTTGTTGATTCCTTGGCAAACTCGAATTCAAAACCTTTGGAACAAGGCTTAGTCAAAGTCAAAAAGAACAATGTCAGCACAAGGATCTCAGCTAGGCCTCCCATTGCTGGGCAAACAACACGTTCATCCTCAAGTCCAAGTTCTGAATTTCGATATGATGAGAGCTCTGCTTCATCCTCCATTTGCACTTCCACAACACCAATATCTGGGAACACTGTGTTGGCCTCTGAAAGGACAGAGGATAGCAACGTGAGTAGGCCGAGTTACATGAACCTCACCGAGTCAACCAAGGCAAAACAAAAGGCAAGCAATGTCGTCGGGTATCACAGAAGTCAAAGGCAGCAATCGATGGACGAGTTTCAGTTCCTGAAAAGGTCAGGGATTTTCACCAATGGGGATTCTAAAAGCACTGCAGGTTCGGGTTCTGACCCTTCAATCAACTTCTCAAGGCCATTTTACCTTCCCAACCACTTGGACAAGTGCTCAACAAAGGCTCGTTGA 2145 0.4657 MKVCQDYTSKIELPVVSTHFYVSLVRRYSVIMVYVCLFGGLRGNGASVIRIIPYAALHFMTYERYKCWILENCPTLGSGPVIDLLAGSAAGGTSTLCTYPLDLARTKLAYQVVDTRGSIKGVMEDVHSRSAHNGIKGVLTRAYKEGGVRGLYRGVALAGLFGQTLTYPIDVVKRQMQVGSLQNSAHGDVRYRNAFEELRIIVANQGWRQLFAGMSINYIRIVPSAAIGFTTYDMMKAWLGVAPQQKSVWVAFAEIVLMEYASRSRLAGMGASGKWVRSLIGLRKSDKDDHAKEGGGKSKKWRLWRSSSGDMASWKGFRGNHRAASEGSDSPVANAFTAAMATVIRAPPKDFRLVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQMILNERRTKDDLLKQAEEGWCDSKGTLEEVKAKLQMRQEGAFKRERVIAYSLAQKQWRSTPCSNARTNTSLKNFEIDKSNWGWNWLERWMAAKPWETRLMEQSQTDASEKIKTPPPKKFVDSLANSNSKPLEQGLVKVKKNNVSTRISARPPIAGQTTRSSSSPSSEFRYDESSASSSICTSTTPISGNTVLASERTEDSNVSRPSYMNLTESTKAKQKASNVVGYHRSQRQQSMDEFQFLKRSGIFTNGDSKSTAGSGSDPSINFSRPFYLPNHLDKCSTKAR 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0753 714 FunFam IQ-domain 11 355 406 - -
Lele28g0753 714 MobiDBLite consensus disorder prediction 577 614 - -
Lele28g0753 714 ProSiteProfiles IQ motif profile. 356 384 IPR000048 GO:0005515
Lele28g0753 714 Gene3D Mitochondrial carrier domain 157 273 IPR023395 -
Lele28g0753 714 SUPERFAMILY Mitochondrial carrier 21 234 IPR023395 -
Lele28g0753 714 MobiDBLite consensus disorder prediction 678 697 - -
Lele28g0753 714 Gene3D Mitochondrial carrier domain 19 156 IPR023395 -
Lele28g0753 714 PRINTS Mitochondrial carrier protein signature 43 63 IPR002067 GO:0055085
Lele28g0753 714 PRINTS Mitochondrial carrier protein signature 93 111 IPR002067 GO:0055085
Lele28g0753 714 SMART iq_5 355 377 IPR000048 GO:0005515
Lele28g0753 714 SMART iq_5 378 399 IPR000048 GO:0005515
Lele28g0753 714 Pfam IQ calmodulin-binding motif 358 377 IPR000048 GO:0005515
Lele28g0753 714 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 238 IPR018108 -
Lele28g0753 714 PANTHER IQ-DOMAIN 5-RELATED 269 661 - -
Lele28g0753 714 ProSiteProfiles IQ motif profile. 380 407 IPR000048 GO:0005515
Lele28g0753 714 Pfam Mitochondrial carrier protein 80 156 IPR018108 -
Lele28g0753 714 Pfam Mitochondrial carrier protein 156 239 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0753 Lele-ChrLele28 4792764 4799971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0753 269 708 IQD Protein Family AT2G26180 61.573 3.51e-152 446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0758 25 4811466 4814358 Lele28g0753 28 4792764 4799971 hybridization
Lele26g0765 26 4870336 4878673 Lele28g0753 28 4792764 4799971 hybridization