Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0744 ATGCATGCAGGAGCAATTTCCATCTTTGGGGTCAAGGCCTGGTCAATATTGCCTAAATCAGAGGACAAATTGAGGATGGCATTCAAAGGCGGTGGTGGCAGCTGTGGCGAGCAAAACCTAATCATGTCTGTCCACCATCCATTTGATGGCAGAGCTCTGCCTCTAAACACCACAGTGGTGGCCGTCGACAAAGGCAAGACCAGTTTATATGCCTTCCGGTGGGCACTTAATCATCGTGATAGTCCAATCATCGTCGCTCTCCACGTTAGGCCAAAAACCATTCCACCCCATGAGGGCCTCAAGGTTTTGCCCCCTGACGAAAGCGATGTAGCCAATGTTTTCTCTGCATTACGAGGAGTAAGTCCACATAAGGTGGTGACGATAAAAGAAGCCGTAGTTGACGATAGTGATGTTGTCAAAGGAATTTCAGACTTTGCAAACAAATATCACGTCGGCAGCATCGTTATCGGCGCTACGGCTAGCTGGAACTCTCTGGCAAGGAAATTTATAGGTTTTGATTTGCCAACGGCCATAATCAAATCAGCTCCAGATTATACTTCTGTGTACGTAATTGCAAAAGGGAAGATAGTCTCAGCTCGATCAGCCCTACGTCCTATGGCAAATATTTTTGTCCAATCATCGAAACAACGGCAGGCACTTCAACCAAATGATGCAGAAAGCGGAGTAAGGGAACATGCAGCTAAAAGAGGATGGACGACAGAGGGGTCAGCAAGAACTGAGAAGAGCAACAATGGAGTAAGGCAAAAGAGTTCTGGCAGTTCGTCGATGGATAAAATCGCGTTGAAGCCATCAGTTGGCCCTGATTCTTTTTCGGACGAAAGTGTTTCATCTGATCTAACTAATCAAGATTTGGAGTTTAGCTTTTCATCTGATGGCTCCAGGACGTCATCATCTTCCCAGCCCTCAAAAGAATTAGAAGATGAAATGAAAAGATTGAGGCTTGAACTGAAGCAAACCATGGACATGTACAGCTCAGCTTGCAAAGAGGCAATCTCAGCAAAAAATAAGGCTAACGAGATTACTCAATGGAAACTAGAGGAGGCACGTAAACTTGAGGAGGCTATATTGTCAGGAGAGGCAGCTCTTGCACTAGCAGAAAAGGAGAAGGCTAGAGCCCTAGCTGCCATAGAAGAAGCTGAGGAGGCCAAGAAAATGGCTGAGAAGGAAGCAGAGAGAAGGAAACATGCAGAGCTAAAGGCCAGGAAAGAGGCAGAAGAAAAGGACCGAGCATTAACTGCTTTGGCTAAAAATGATGTTCGATATAGAAAATATACTATAGAGGAGATCGAACAGGCTACTGAAAAGTTCTCCCCATCCTTGAAAATAGGTGAAGGCGGATATGGGCCTGTGTTTAAAGGTGAACTTGATCACACCCCAGTTGCGATCAAAATCTTAAGACCTGATGCTGCTCAAGGCAGGAAGCAGTTTCACCAAGAGGTTGAGGTATTATGCTGCATTAGACATCCTAACATGGTCCTCCTCCTTGGTGCCTGTCCTGAGTATGGGTGTCTGGTGTATGAATACTTGGAAAATGGTAGCTTAGAGGATAGATTGTTTCAGAGGAACAATAGCCCACATCTTTCATGGAGGTTAAGGTTCACAATAGCTGCTGAAATTGCAACTGCACTTCTTTTCCTTCACCAAAGCAAGCCAGAACCCCTTGTGCATCGGGACCTAAAACCAGCCAACATCCTCATAGACCGGAATTATGTGAGTAAAATCAGTGATGTAGGCCTGGCACGATTGGTTCCGGCATCTGTAGCTGATTCTGTCACACAATATTACATGACTTCAGCTGCAGGAACCTTTTGCTACATTGATCCTGAGTATCAACAAACAGGAAAGTTAACAACTAAATCAGATGTGTATTCATTGGGGATCATGCTACTACAAATTGTGACGGCTAAGCCTCCCATGGGTCTTTCTCACCATGTCAAAAGGGCAATTGAAAAGGGAAAATTTTCAGAGATGCTTGATCCTACAGTGACTGATTGGCCAGATGAAGAGGCCCTTGCATTTGCCAAAGTTGCAGTGAGTTGCGCAGAGCTTAGCAAGAAGGACAGGCCTGATCTTGCAACAGTTGTTGTGCCAGAGCTTAACCGCTTAAGGAATTTTGCTTTCACGTCTCATCCAAGTCCTATTGTCATCAACAATCAGAGTCCACCTCCACGAAGTTCATGA 2202 0.4523 MHAGAISIFGVKAWSILPKSEDKLRMAFKGGGGSCGEQNLIMSVHHPFDGRALPLNTTVVAVDKGKTSLYAFRWALNHRDSPIIVALHVRPKTIPPHEGLKVLPPDESDVANVFSALRGVSPHKVVTIKEAVVDDSDVVKGISDFANKYHVGSIVIGATASWNSLARKFIGFDLPTAIIKSAPDYTSVYVIAKGKIVSARSALRPMANIFVQSSKQRQALQPNDAESGVREHAAKRGWTTEGSARTEKSNNGVRQKSSGSSSMDKIALKPSVGPDSFSDESVSSDLTNQDLEFSFSSDGSRTSSSSQPSKELEDEMKRLRLELKQTMDMYSSACKEAISAKNKANEITQWKLEEARKLEEAILSGEAALALAEKEKARALAAIEEAEEAKKMAEKEAERRKHAELKARKEAEEKDRALTALAKNDVRYRKYTIEEIEQATEKFSPSLKIGEGGYGPVFKGELDHTPVAIKILRPDAAQGRKQFHQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYLENGSLEDRLFQRNNSPHLSWRLRFTIAAEIATALLFLHQSKPEPLVHRDLKPANILIDRNYVSKISDVGLARLVPASVADSVTQYYMTSAAGTFCYIDPEYQQTGKLTTKSDVYSLGIMLLQIVTAKPPMGLSHHVKRAIEKGKFSEMLDPTVTDWPDEEALAFAKVAVSCAELSKKDRPDLATVVVPELNRLRNFAFTSHPSPIVINNQSPPPRSS 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0744 733 MobiDBLite consensus disorder prediction 228 242 - -
Lele28g0744 733 ProSiteProfiles Protein kinase domain profile. 443 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0744 733 Coils Coil 355 415 - -
Lele28g0744 733 Pfam Protein tyrosine and serine/threonine kinase 448 702 IPR001245 GO:0004672|GO:0006468
Lele28g0744 733 PANTHER OS02G0152300 PROTEIN 59 715 - -
Lele28g0744 733 Coils Coil 309 329 - -
Lele28g0744 733 Gene3D Transferase(Phosphotransferase) domain 1 516 716 - -
Lele28g0744 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Lele28g0744 733 Gene3D HUPs 44 173 IPR014729 -
Lele28g0744 733 SUPERFAMILY Protein kinase-like (PK-like) 427 702 IPR011009 -
Lele28g0744 733 MobiDBLite consensus disorder prediction 214 313 - -
Lele28g0744 733 Gene3D Phosphorylase Kinase; domain 1 421 515 - -
Lele28g0744 733 SMART serkin_6 443 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0744 733 CDD STK_N 57 194 - -
Lele28g0744 733 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 416 515 - -
Lele28g0744 733 Pfam Universal stress protein family 59 171 IPR006016 -
Lele28g0744 733 FunFam U-box domain-containing protein 51 516 716 - -
Lele28g0744 733 MobiDBLite consensus disorder prediction 276 307 - -
Lele28g0744 733 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 57 160 - -
Lele28g0744 733 MobiDBLite consensus disorder prediction 243 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0744 Lele-ChrLele28 4738783 4742121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0744 128 718 Receptor kinase-like Gene Family AT5G12000 60.098 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele28g0744 PK_Tyr_Ser-Thr 1.8e-40 CL0016