Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0734 ATGGGAGATCCCTGGACTATTGTTCCGTACAATGACCCCTACGATTTCGCATTACCACAGGACATCCCCGTTTTCCAGGATCATCATATTCCACCCCCTGCTGGTCCACCCATTGAGCACAATGCTTCTTCGTTCCCACAACAAAGTGATACATTTTTTCAGAGTAATGATCCGAATTCGGGACAAGTGATTCAAGATGCCCCAATGTGTGATTTTCACCTTGAAGAGGGCAACTTTGTAGCGGGTCCATCCCAACTTCACGGGGAAAGCCATCCAAGTCAAGAGAATATGCAGTCACAGAATTTCCCCAATGTGCTTCAATTTTCACATTGGCCAGAAAATCCAGTCCCTTTTCATTGTAGTTGCTGCCAAGTTCTTAGAGAAATCATTCACACGAATGGGATTCAGTTCGCAAAACTGGAGATTCACGGAAGGTTGGGTGTGATCTCTCATGCAATTCTTCTACAGAATATGAATGTGGGTTCCTCAGGCAGCGGTCAGCAAGTTCACATGTTCGATTTTTGCAGCAGAAGTATGGAGGATGTCAAGAATTTTATAAGGCAGTACTGTGCGGAGAAAAATGCAGGAGGCTACTTCACTTTGCCAGATCCACTGTCAGATTATTATGAAGCCCTCTCCATTGGAATGGAATGGAATGAAGATCTAAGTGACGAATTCCTTGACACGCAAGCTGATAATTCAGGGGGAGCATCTGATGAGACCGAGGACATGGATAGGACTGCTAGGGCCAGTCTTGCAACGCAGAGGGAAAGAGCGGGGAAGATGAAGCTGAGTGATTTCAAGGCGGTGTTTCATCTACCTATTGAAGAAGCCGCGAGGCAAGTAAACTTATGTCCCACAGTTGTGAAGAAGATATGCCGTAAAGAAGGATTACCCAGATGGCCTCACAGAAAGATAAAGAGCATCTTGAGGAAGATGAACATACTGAGAGGGAGTTTAAACTCCGCCGAGGCAGCGGCGAGGGCACAGACGGAGGCAGAAATTGAGAGACTTCGTCGAGAAATGATTGACCATTGTGGTGGAATGCTCCCGACTTCATTAATTTTGGATGCTTGA 1077 0.4605 MGDPWTIVPYNDPYDFALPQDIPVFQDHHIPPPAGPPIEHNASSFPQQSDTFFQSNDPNSGQVIQDAPMCDFHLEEGNFVAGPSQLHGESHPSQENMQSQNFPNVLQFSHWPENPVPFHCSCCQVLREIIHTNGIQFAKLEIHGRLGVISHAILLQNMNVGSSGSGQQVHMFDFCSRSMEDVKNFIRQYCAEKNAGGYFTLPDPLSDYYEALSIGMEWNEDLSDEFLDTQADNSGGASDETEDMDRTARASLATQRERAGKMKLSDFKAVFHLPIEEAARQVNLCPTVVKKICRKEGLPRWPHRKIKSILRKMNILRGSLNSAEAAARAQTEAEIERLRREMIDHCGGMLPTSLILDA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0734 358 PANTHER PROTEIN RKD4 46 342 IPR044607 GO:0003700
Lele28g0734 358 Coils Coil 321 341 - -
Lele28g0734 358 Pfam RWP-RK domain 262 309 IPR003035 -
Lele28g0734 358 ProSiteProfiles RWP-RK domain profile. 249 329 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0734 Lele-ChrLele28 4677346 4678843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0734 183 343 AtRKD Transcription Factor Family AT4G35590 28.090 3.09e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lele28g0734 RWP-RK 1.1e-19 No_clan