Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0730 ATGAACTCGAATTTCAGAGACAGCCCTGAAATTATGCAGAGTTTAACTTCGCCGCGCCTGTCTCGGCAATCATCCAAAGCGAGTAGCAAGCACAAGCAACTAGTGGATGCACCAAGCCCTGTTCATGGTGGATGCTGCCGAGGGTTTGGTAATGTGAAGACCACGGGACCCACTTTGTCAACCTTGCAACACCAGCACCAGCTCCAACATTCCAAGAGATTGGAAGCTAAGGTGGCAGATCTGGAGAAAGAAGTGCAGAGGCAGAAAGAGCTGCGAGTGATGTACAGGAAAAGGATGGAAAGAACGCAGGAGTATCTGAGATACTGCCTCCAAATAGCACAAGAGAATGGTATATTGGACCTCATTACCCACTCCAAAGGTGACCCCCAACAATCCCCTTTATCAGGCCCCGTTGTCAACTCCGCCGCTAGTCCTAAGATTCGCTCTCCCATCCACCGCCACCAGCACCACCCAGATCTTGCAGCCATCATTGATCAAGCCAAAATCCATGGATGGTACATCCATCCTAACGAGATTCAGCTGGGGGTGAAGATAGGACAGGGAACCACGGCGGAGATATACAGAGCAACTTGGCGAGGATATGACGTGGCGGTGAAGTGCTTATCTGCGGAGTTTTTCAGGACAAACGGTAACGGCGTCGTATTTTTTTCCCAAGAGGTGGAGACTCTGTCGAGGCAGAGGCACCGGTTTGTGCTTCAGCTGATGGGCGCATGCCTGGACCCTCCTCGCCACGCCTGGGTGGTCACCGAGCATGTCAGTACCACCCTCAAGGACTGGCTTCACGGCCCAGGCAAGAGACGCCGAGACAGGCAGGTCCCACTACCTTCCCTCAAAGACAGAATGACGAGGGCCCTGGAGATCTCTCAAGCCATGCAGTATCTGCATGAACAGACGCCCAAGGTCATCCACCGTGACCTCAAACCCAGCAACATTTTCTTGGACGACGCCCTTCACGTCAGAATCGCCGATTTCGGCCATGCCCGCTTCTTGGCCGACCACGAAATGGCCCTCACCGGGGAAACAGGCATGCCATCTATATATATATGGGCTCTCTCTCCCTCTCTCACACACACACACAATTCATCTCTTGGTCTCTGA 1119 0.5308 MNSNFRDSPEIMQSLTSPRLSRQSSKASSKHKQLVDAPSPVHGGCCRGFGNVKTTGPTLSTLQHQHQLQHSKRLEAKVADLEKEVQRQKELRVMYRKRMERTQEYLRYCLQIAQENGILDLITHSKGDPQQSPLSGPVVNSAASPKIRSPIHRHQHHPDLAAIIDQAKIHGWYIHPNEIQLGVKIGQGTTAEIYRATWRGYDVAVKCLSAEFFRTNGNGVVFFSQEVETLSRQRHRFVLQLMGACLDPPRHAWVVTEHVSTTLKDWLHGPGKRRRDRQVPLPSLKDRMTRALEISQAMQYLHEQTPKVIHRDLKPSNIFLDDALHVRIADFGHARFLADHEMALTGETGMPSIYIWALSPSLTHTHNSSLGL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0730 372 Gene3D Phosphorylase Kinase; domain 1 167 259 - -
Lele28g0730 372 Coils Coil 64 98 - -
Lele28g0730 372 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 77 351 - -
Lele28g0730 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Lele28g0730 372 SMART serkin_6 179 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0730 372 ProSitePatterns Protein kinases ATP-binding region signature. 185 206 IPR017441 GO:0005524
Lele28g0730 372 MobiDBLite consensus disorder prediction 124 143 - -
Lele28g0730 372 ProSiteProfiles Protein kinase domain profile. 179 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0730 372 MobiDBLite consensus disorder prediction 1 39 - -
Lele28g0730 372 Pfam Protein kinase domain 182 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0730 372 Gene3D Transferase(Phosphotransferase) domain 1 260 367 - -
Lele28g0730 372 MobiDBLite consensus disorder prediction 125 139 - -
Lele28g0730 372 MobiDBLite consensus disorder prediction 1 32 - -
Lele28g0730 372 SUPERFAMILY Protein kinase-like (PK-like) 164 344 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0730 Lele-ChrLele28 4660262 4661810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0730 172 353 MAP Kinase Kinase Kinase AT5G11850 34.043 2.85e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Lele28g0730 Pkinase 2.9e-26 CL0016