Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0724 ATGAGGAGTCCAAGTTGCTCTGGGGAAGTAGAAGAACTGATGAACAAAGGAGCATGGACTGCTCAAGAAGACAAGTTGCTCACTTCTTACGTTATGGCCCACGGCGAAGGCAAGTGGACCCACATCCCTATAAGAGCTGGCTTGAATAGAAGTGGCAAAAGCTGTAGGCTTCGATGGTTGAACTATCTCAGGCCTGATATCAAGCGAGGTAACATCACCCAAGACGAAGAAGACCTCATTATCAGACTTCATAAACTTCTTGGTAACAGGTGGTCTCTTATAGCTGGAAGGCTACCGGGAAGAACAGACAATGAAATCAAGAACTACTGGAACACTACCTTGGTGAAGAAGCTTAGAACACAATCTGCAGGCGCAACGTCTGAGCAACATCCATCCAGCAAATCAAGCGAGTCTGATGATATCACTCGACCACAAGTAATCCACATGAAGGCCCGAAGATTAAAAAACGTGGTTATCCAACATTCTCCTAATTGTCCCGAGGAAACGTCCGCCGTCAACTCTCTAGCTTCCAACCAGTTAGGGCTTCACAAAGCTCATCACCTAGCTCCCCAGTTCACGAACCAGTTTCAGCAGGCTGTAGATGATCAATATCAGAATTCAGATATGAACTTGTTGGGTTCGGAACATAATGATGAGTTTCAAGATGAACAGAATGCAGTAGATTTTTTCAGAGAGTTTAACCTTGACAATAGCATGGCCATGGCCATGGATGCGCAAGCGGACTGGTTCTCACATGTTGACGAACTTGTCAATTGTGGGACAAGTGATGGATTCAGGAACATTGGCACTACGGATCTGGATTTAATGACATTCATGATGGATTCTGCCTCTGGGGATTGGCCCTGA 867 0.4567 MRSPSCSGEVEELMNKGAWTAQEDKLLTSYVMAHGEGKWTHIPIRAGLNRSGKSCRLRWLNYLRPDIKRGNITQDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLVKKLRTQSAGATSEQHPSSKSSESDDITRPQVIHMKARRLKNVVIQHSPNCPEETSAVNSLASNQLGLHKAHHLAPQFTNQFQQAVDDQYQNSDMNLLGSEHNDEFQDEQNAVDFFREFNLDNSMAMAMDAQADWFSHVDELVNCGTSDGFRNIGTTDLDLMTFMMDSASGDWP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0724 288 Gene3D - 71 144 - -
Lele28g0724 288 CDD SANT 73 114 IPR001005 -
Lele28g0724 288 SUPERFAMILY Homeodomain-like 15 110 IPR009057 -
Lele28g0724 288 MobiDBLite consensus disorder prediction 120 143 - -
Lele28g0724 288 SMART sant 68 116 IPR001005 -
Lele28g0724 288 SMART sant 15 65 IPR001005 -
Lele28g0724 288 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lele28g0724 288 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 197 - -
Lele28g0724 288 FunFam Myb transcription factor 16 68 - -
Lele28g0724 288 CDD SANT 18 63 IPR001005 -
Lele28g0724 288 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lele28g0724 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 63 IPR017930 -
Lele28g0724 288 Gene3D - 16 68 - -
Lele28g0724 288 FunFam Transcription factor TT2 72 142 - -
Lele28g0724 288 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lele28g0724 288 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Lele28g0724 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0724 Lele-ChrLele28 4632284 4633333 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0724 2 163 MYB Transcription Factor Family AT4G38620 54.321 1.15e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele28g0724 Myb_DNA-binding 2.2e-15 CL0123