Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0721 ATGAGGAGCACTCGTTCGCGCAGTAATGAAGGGCAGAAAAGGGAGGCTTGGACCGCTCAAGAAGACCAAATACTGGCAGCCTATATCAGCGCACATGGCGAAGGCAAATGGAAAAACATCCCCAAACAAACTGGTCTGAGGAGATGTGGAAAATCGTGCAGGCTTCGGTGGATGAATTACCTGAGGCCAGATATCAAGAGAGGCAACATCACTGAAGACGAAGAAGACCTCATTCTCAGGCTCCACAAGCTCTTGGGCAACAGATGGTCACTGATAGCGGCAAGACTTCCTGGGCGAACAGACAATGAAATCAAGAACTACTGGAACACCCACTTGGCCAAGAAGGAGCAAGAGAAGCGATCCAAAAGGGAAATTGCAGAATCAAGAGTATCCCAGCAGGAGGCTTTGGCGACGGCTCCTCAAAGCACTCACGTGGCATTAGACACGTTAGCTCCGATGGAACCTCATGGAGATTCTGATGTCGCGGCAGTGGAATCTGTTGCTGTTGATGGACTATCATCGCCGGCCGAAGAAAACGTGGATGGGGCTTTGATGGATTTTGATCTCGAGGACGTGGACGTTTTGGAGTTTCTGGACTTGGATTTCACTGGACTTGCAGATTTTGACATGTTGATTAACATGGACGATTCGCATCAAGAAGGAAGGCAGGGCGATTCTCGGTCATTTTCATTTTCTGAGGAAACAGATGCTAAGCGGGGGAACCAGAATGTCTCCGATTAG 741 0.4926 MRSTRSRSNEGQKREAWTAQEDQILAAYISAHGEGKWKNIPKQTGLRRCGKSCRLRWMNYLRPDIKRGNITEDEEDLILRLHKLLGNRWSLIAARLPGRTDNEIKNYWNTHLAKKEQEKRSKREIAESRVSQQEALATAPQSTHVALDTLAPMEPHGDSDVAAVESVAVDGLSSPAEENVDGALMDFDLEDVDVLEFLDLDFTGLADFDMLINMDDSHQEGRQGDSRSFSFSEETDAKRGNQNVSD 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0721 246 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 135 - -
Lele28g0721 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele28g0721 246 MobiDBLite consensus disorder prediction 217 246 - -
Lele28g0721 246 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele28g0721 246 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele28g0721 246 MobiDBLite consensus disorder prediction 217 234 - -
Lele28g0721 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele28g0721 246 CDD SANT 71 112 IPR001005 -
Lele28g0721 246 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele28g0721 246 MobiDBLite consensus disorder prediction 118 141 - -
Lele28g0721 246 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele28g0721 246 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele28g0721 246 SMART sant 13 63 IPR001005 -
Lele28g0721 246 SMART sant 66 114 IPR001005 -
Lele28g0721 246 Gene3D - 71 140 - -
Lele28g0721 246 FunFam MYB-related transcription factor 13 66 - -
Lele28g0721 246 CDD SANT 16 61 IPR001005 -
Lele28g0721 246 Gene3D - 6 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0721 Lele-ChrLele28 4617402 4618305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0721 2 115 MYB Transcription Factor Family AT3G13540 69.298 3.66e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele28g0721 Myb_DNA-binding 2.5e-14 CL0123