Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0712 ATGTGTGGAGCTTGCGTCTCACGAGTTAAAAACATTTTGTCTGCTGATGAGCGAGTTGACTCGGTTGTCGTTGACATGTTGACTGAGACCGCCGCCATTAAGTTGAAAAAACTCGACGTAGCCCCGGCTTCAGTTCTGGAGACCGATTATCCCGGGACTGTAGCCGGGGCCCTTGCTGGGAGGCTGACTCAATGTGGTTTTCCCACAAAACGGAGTGTTTCGGGTACAGGAATGGAGGAAAATGTGAGGAATTGGAAGGATTTGGCGAAGAAGGAGGACGAGCTACTTACGAAGAGTCGGAACCGTGTTGCCTTTGCTTGGACTTTGGTGGCGTTGTGCTGTGGATCGCATGCTTCGCATATTTTACATTCTTTAGGAATCCACATTGCTCATGAGTTACTGGTCGATGGCATAAGGGCATTCAGAAAGGGATCACCAAATATGAACTCTCTTGTGGGATTCGTTTCTATTGCTGCCTTCATCATCAGACGATCTTTGGAAGAGAAGGCGAGAATTCAGGCATCTAGTGATATGAATGAACTTCTTGATGGTCCTTTAAGGATTGAAGCTTCTTCAACGGGCTCCAACACAATGATATCCAAAATTGCGCATGGTTAGTATTTAATTGGGTCACATGTTTTTCCAGATGTTTCACTTAATGATATTGCGGGCCCAGAAGGAAATCCTTTGCTTTTGAGCTTGAAACTTTCTGTAGATGTCTTGGTGGTATCTTGCCCTTGTGCACTGGGCCTTGCCACACCCACAGCAATCCTGGTTGGCACCTCACTGGGTGCAAGAAAAGGACTTCTCATTAGAGGTGGAGATGTGTTGGAACGCTTAGCTAGCATTAACCATGTTGCTCTAGACAAGACAGGAACCGTCACCAGAGGAAAACCAGTTGTCTCTGGTGGGGGCTCTTTTAATTATGAGGAATCAGAAATTCTTCGGATTGCTACTGCAGTAGAGAAAACAGCATCTCATCCAATAGCAAAGGCTATTATCAATAAAGCTGAGTCATTAGAAAAAGGGCAGTTAGTTGAACCGGGTTTTGGAACCTTGGCAGAAATTGCTGGGCGGTTGGTTCCTTGGAATGGGCCTTCAGACTATTCAAAAACAGTTGTTTATGTTGGACGTGAAAGAAAAGGCATCATTGGTGCTATTGCAATATCTGACATTTTACGTGATGATGCTAAATCTACAGTAATGGGGTCGCGTGCTTATTTTTACTGCTTCCTTATTGCATTATTTACTGACATTCTGCTGGACATTGTGTTGCAATGTTATGATGTTATATATCTTCTTAAGTCTCTCTTGGCTTTCAATAAGCTATCTGCTGTGTTCAGAGGTTCACGGAGATCCTGGAATGAGGTAGGTGATGGGATAAATGATGCACCCTTTTTGGCTGTGGCTGATGTTGGGATTTCTCTGCAGAATGAAGCTCAAGAAAATGCTGCATCAGATGCAGCATCCGTTATACTTATTGGGAACAAAATTTCAGAAATTGAGAAACTACTAAATGCCCTAGACCTCGCACAGGCAACCACGGCGAAAGTGTGCCAGAATTTGTCATGGGCAGTCGCCTATAATGTTGTTGCCATAACCATTGCTGCTGGTGTGTTACTTCCCCAATTTGATTTTGCTATGACACCTTCACTTTCAGTGTTTCCTCGTTTTTCTTCATCTGTTTCTGATCGCACTGTAGTCCTGGACTGCAGAGATGATGCGTTAAGGGGAGATATTCTGCCCAAACCTGCAAATGGGCGGAGAGAGCTTTTATGTGTCTGCTTGGCTGAAGACAGGTCTACGGAGAGAGCAGTTATGGCATTTCGGTTTGGACTTGTTCTTCTGGCCTTTGTCATTTGTTTGAACTTCAACTCAGTGGATTCAGACGATGGTAAGTCGTCCATTTTCTCCAGGTCTTCATACCACTTGGACTATGCTACTCTTTTCTCTGTTTTTTGCGGGATGTTCGGAGACTCTTCATCTTCCGATTATTGTATCTGGAGTGGGATCACTTGCGATAATGTCACCTTCAATGTCGTTGCACTCGACCTTAGGGGAAACCGATTATCTGGCCAGATACCAGATGAGATTGGTGACTGTTCCTCTTTGCAGAGCTTGGACTTGTCATTTAATGAAATACGGGGAGACATACCATTTTCAATTTCAAAGTTGAAACAACTGGAAAATCTAATTTTGAAAAATAACCAGTTAATAGGTCCAATTCCTTCTACACTGTCTCAGATTCCCAACTTGAAGATTCTTGATGTGAGGAACAACAGCTTGACTGGCAGCATTCCTGAAAGTATAGGCAACTGTACTGCATTCCAGGTCTTGAATTGCTTAGCCTTGTTTGAATTTGATAGGTCATTGCAAGGCAATAAACTCTCTGGACCGATTCCATCAGTGATTGGGCTGATGCAAGCACTTGCTGTATTGTATTTGCATGGGAATAAACTGTCTGGCCACATTCCCCGAGAGCTTGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCATTTGAGTGGACATATCCCACCCGAGCTGGGAAAGCTTACTGATCTGTTTGATTTCAATGTGCATGGAAACAAGTTAAATGGAACAATCCCCCCAACTTTTCAGAGATTGGAGAGTATGACGTACCTTAATCTTTCATCCAACAAGCTTCGAGGCCCCATTCCAATTGAGCTGTCAAGGATTGGTAATTTGGATACATTGGATATTTCAAATAATAATATAAGTAGCTTCATTCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGCAGAAATCATCTAACTGGATTTATTCCAGCAGAGTTTGGTAATTTGAGAAGTGTTATGGATATAGATCTTTCAAATAACCAGCTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTGCAGAATATGCAATCCCTGAGACTGGAAAACAACAATCTATCCGGGGATGTGGCTTCTCTTATAAATTGCCTTAGCCTTTCTTTACTTTTCATTGGAAACTCTGGTCTCTGTGGCTATTGGATGACTTCACCTTGTCATAGATCTCATCCCACAGAGCGAGGCATTCCTTTCTATGAAGTTGGATTGAGGTTTTTCTATGACAATATGCAAACTGAACTACTATATGCTATTGGACATGCAGTTACGCTATCTAAGGCAGCCATCCTAGGAATTGCTCTTGGTGCCCTTGTGATTCTTCTTATGATATTACTAGCAGCGTGTCGGCCATACAATCCATCTCCATTTCCAGATGGATCACTTGACAAGCCAGATGACGCTAACAAGGGTAAACCTTGTGCCTGGAAAATGGCAGTTACTTATTCACCGCCAAAGCTAGTGATTCTTCATATGAACATGGCCCTTCACGTGTATGAGGATATTATGAGGATGACTGAAAATCTGAGTGAGAAGTACAAGATTGGATATGGTGCATCAAGCACAGTTTATAAATGTGTCCTTAAGAATTGCAAGCCAGTAGCTATCAAGAGGCTCTACTCTCACTATCCCCAAAGCTTGAAAGAATTTCAGACAGAACTTGAGACGGTTGGTAGCATCAAGCACCGAAACCTGGTTAGTCTCCAAGGCTACTCCTTGTCCCCTTATGGGAACCTTCTCTTCTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTCCATGACCCTGAATATGCTCGAACTTCCCGGCTCACTGAGAAGTCTGATGTTTATAGTTTCGGCATTGTTTTACTTGAGTTGCTCACTGGCAGGAAAGCTGTGGACAATGAATCAAATCTCCATAACCTGATTTTGTCGAAGACAGCAAACAATGCTGTGATGGAGACGCTTGATCCTGATATTACTGCCTCATGTAAGGCTATGGGAGCTGTAAAGAAGGTATTTCAGCTAGCCCTGTTGTGCACAAAGAGACAACCAGTTGATAGGCCGACAATGCACGAGGTGATGCGCGTGCTGGGAAGCCTTGTACCACCCACCTCCCCACCAAAACAAGCAGCCCCACCTCCTGCAGCTTCTGCTCTGCTTCCATCTGCAAAGGTGCCATCTTGCTATATGGATGAGTATGCAAATCTGAATGCTCCACACTTGGTGAACTGCCCCTCCATGAGCACCTCTGATGCCCAGCTCTTCCTCAAATTTGGGGAGGTAATTTCTCAGAACAGTGAATGA 4191 0.4369 MCGACVSRVKNILSADERVDSVVVDMLTETAAIKLKKLDVAPASVLETDYPGTVAGALAGRLTQCGFPTKRSVSGTGMEENVRNWKDLAKKEDELLTKSRNRVAFAWTLVALCCGSHASHILHSLGIHIAHELLVDGIRAFRKGSPNMNSLVGFVSIAAFIIRRSLEEKARIQASSDMNELLDGPLRIEASSTGSNTMISKIAHGXYLIGSHVFPDVSLNDIAGPEGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINHVALDKTGTVTRGKPVVSGGGSFNYEESEILRIATAVEKTASHPIAKAIINKAESLEKGQLVEPGFGTLAEIAGRLVPWNGPSDYSKTVVYVGRERKGIIGAIAISDILRDDAKSTVMGSRAYFYCFLIALFTDILLDIVLQCYDVIYLLKSLLAFNKLSAVFRGSRRSWNEVGDGINDAPFLAVADVGISLQNEAQENAASDAASVILIGNKISEIEKLLNALDLAQATTAKVCQNLSWAVAYNVVAITIAAGVLLPQFDFAMTPSLSVFPRFSSSVSDRTVVLDCRDDALRGDILPKPANGRRELLCVCLAEDRSTERAVMAFRFGLVLLAFVICLNFNSVDSDDGKSSIFSRSSYHLDYATLFSVFCGMFGDSSSSDYCIWSGITCDNVTFNVVALDLRGNRLSGQIPDEIGDCSSLQSLDLSFNEIRGDIPFSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDVRNNSLTGSIPESIGNCTAFQVLNCLALFEFDRSLQGNKLSGPIPSVIGLMQALAVLYLHGNKLSGHIPRELGNMTKLHYLELNDNHLSGHIPPELGKLTDLFDFNVHGNKLNGTIPPTFQRLESMTYLNLSSNKLRGPIPIELSRIGNLDTLDISNNNISSFIPSSLGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMQSLRLENNNLSGDVASLINCLSLSLLFIGNSGLCGYWMTSPCHRSHPTERGIPFYEVGLRFFYDNMQTELLYAIGHAVTLSKAAILGIALGALVILLMILLAACRPYNPSPFPDGSLDKPDDANKGKPCAWKMAVTYSPPKLVILHMNMALHVYEDIMRMTENLSEKYKIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQSLKEFQTELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDLLHDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHNLILSKTANNAVMETLDPDITASCKAMGAVKKVFQLALLCTKRQPVDRPTMHEVMRVLGSLVPPTSPPKQAAPPPAASALLPSAKVPSCYMDEYANLNAPHLVNCPSMSTSDAQLFLKFGEVISQNSE 1396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0712 1396 Gene3D - 1 72 - -
Lele28g0712 1396 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1113 1217 - -
Lele28g0712 1396 ProSiteProfiles Leucine-rich repeat profile. 905 926 IPR001611 GO:0005515
Lele28g0712 1396 Pfam Leucine Rich Repeat 751 773 IPR001611 GO:0005515
Lele28g0712 1396 Gene3D - 296 361 IPR023299 GO:0000166
Lele28g0712 1396 Pfam Leucine rich repeat 680 738 IPR001611 GO:0005515
Lele28g0712 1396 Pfam Leucine rich repeat 929 988 IPR001611 GO:0005515
Lele28g0712 1396 Pfam Leucine rich repeat 862 916 IPR001611 GO:0005515
Lele28g0712 1396 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 659 942 - -
Lele28g0712 1396 SUPERFAMILY HAD-like 286 548 IPR036412 -
Lele28g0712 1396 Pfam Protein kinase domain 1144 1228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0712 1396 ProSiteProfiles Heavy-metal-associated domain profile. 1 71 IPR006121 GO:0046872
Lele28g0712 1396 CDD HMA 1 48 IPR006121 GO:0046872
Lele28g0712 1396 ProSiteProfiles Leucine-rich repeat profile. 703 726 IPR001611 GO:0005515
Lele28g0712 1396 ProSitePatterns Protein kinases ATP-binding region signature. 1148 1170 IPR017441 GO:0005524
Lele28g0712 1396 Gene3D Ribonuclease Inhibitor 645 784 IPR032675 -
Lele28g0712 1396 SUPERFAMILY L domain-like 663 1017 - -
Lele28g0712 1396 Gene3D - 442 530 IPR023214 -
Lele28g0712 1396 ProSitePatterns E1-E2 ATPases phosphorylation site. 289 295 IPR018303 -
Lele28g0712 1396 Gene3D Transferase(Phosphotransferase) domain 1 1217 1334 - -
Lele28g0712 1396 FunFam Nuclear pore complex protein NUP107 651 784 - -
Lele28g0712 1396 Gene3D - 148 295 - -
Lele28g0712 1396 Gene3D Phosphorylase Kinase; domain 1 1111 1216 - -
Lele28g0712 1396 Gene3D Ribonuclease Inhibitor 787 1024 IPR032675 -
Lele28g0712 1396 ProSiteProfiles Protein kinase domain profile. 1142 1396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0712 1396 PRINTS P-type cation-transporting ATPase superfamily signature 385 396 - -
Lele28g0712 1396 PRINTS P-type cation-transporting ATPase superfamily signature 457 476 - -
Lele28g0712 1396 PRINTS P-type cation-transporting ATPase superfamily signature 287 301 - -
Lele28g0712 1396 Pfam Protein tyrosine and serine/threonine kinase 1230 1325 IPR001245 GO:0004672|GO:0006468
Lele28g0712 1396 SMART LRR_typ_2 927 950 IPR003591 -
Lele28g0712 1396 SMART LRR_typ_2 807 830 IPR003591 -
Lele28g0712 1396 SMART LRR_typ_2 951 974 IPR003591 -
Lele28g0712 1396 SMART LRR_typ_2 749 773 IPR003591 -
Lele28g0712 1396 SMART LRR_typ_2 831 855 IPR003591 -
Lele28g0712 1396 SMART LRR_typ_2 903 926 IPR003591 -
Lele28g0712 1396 SMART LRR_typ_2 975 998 IPR003591 -
Lele28g0712 1396 SUPERFAMILY Protein kinase-like (PK-like) 1130 1345 IPR011009 -
Lele28g0712 1396 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 785 1024 - -
Lele28g0712 1396 SUPERFAMILY Calcium ATPase, transmembrane domain M 226 1077 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0712 Lele-ChrLele28 4550463 4570867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0712 1229 1330 Receptor kinase-like Gene Family AT5G07180 70.588 2.09e-38 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lele28g0712 PK_Tyr_Ser-Thr 2.2e-08 CL0016