Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0710 ATGACTAAGAAGGTTACATGGAAGTCTATCATCTTCACGCTAAACTGTTACAGGACTGATTACCCAACGTTGCAGGAAAAACAACCTTTGAAACGACGAGGTTCATTCCAGAGGTTGTGCCTCTCGGACATAAGCAATTCCAGCTCATCTCAGGCCATTGACGATCTCTCAATTTCTCTGGCCGGTTCAAAACTTCATATATTCAGCCTAGAGGAGCTCAGGGAAGCAACCCATAATTTCTCATGGAGCAATCTGCTTGGTGAAGGCGGGTTCGGACCCGTGCACAAGGGATTCTTTGATGAAAAACTTAGGCGTGGATTGAAAGCTCAGCCTGTTGCTGTCAAACGCCTCGACTTAGGTGGCTTGCAAGGTCATAGGGAATGGCTGGCAGAGATTATCTTCCTTGGACAGCTGCAACATCCACATCTTGTTAAGTTGATTGGGTACTGTTATGAAGAGGAGCATAGGCTTTTGGTTTATGAATACATGCCAAGAGGAAGCTTGGAAAACCAGATCTTCAGGAGATACTCTGCTGTGTTGCCATGGTCAACCAGGATGAAAATTGCACTAGGCGCAGCGAAGGGCTTGGCCTTCCTTCATGAAGTAGATAAACCAGTCATTTACAGAGATTTCAAAGCTTCAAACATTTTGCTGGACTCGGATTACACAGCCAAACTTTCAGATTTCGGGTTGGCAAAGGATGGTCCAGAAGGAGAAGAAACACATGTAACAACACGCGTAATGGGGACACAGGGCTATGCTGCGCCAGAGTACGTAATGACAGGTCATCTCACAACGAAGAGCGACGTGTATAGCTACGGCGTGGTTCTGTTAGAATTGCTCACAGGGAAGCGGGTGGTGGATAAGACCCGACCCAGTAAAGAGCATAGCTTGGTGGAGTGGGCAAGGCCTATGTTAAGGGATCCGAAAAAGCTGTATCGAGTGATAGATTCCAGATTGGAAGGTCAATTTCCTGCTAGAGGAGCTCGAAAGGTGGCTGCTTTGGCTTACAAATGCTTGAGTCACCACCCGAATCCAAGGCCCACCATGTCCGATGTGGTTGCCATATTGGAGACCCTTCAGGGCTTTGACGATGTTTTCATTGGACCATTTGTGTATGTTGCCGTAAGTGAAGGCCGAAAAGAAGCATAA 1152 0.4705 MTKKVTWKSIIFTLNCYRTDYPTLQEKQPLKRRGSFQRLCLSDISNSSSSQAIDDLSISLAGSKLHIFSLEELREATHNFSWSNLLGEGGFGPVHKGFFDEKLRRGLKAQPVAVKRLDLGGLQGHREWLAEIIFLGQLQHPHLVKLIGYCYEEEHRLLVYEYMPRGSLENQIFRRYSAVLPWSTRMKIALGAAKGLAFLHEVDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVTTRVMGTQGYAAPEYVMTGHLTTKSDVYSYGVVLLELLTGKRVVDKTRPSKEHSLVEWARPMLRDPKKLYRVIDSRLEGQFPARGARKVAALAYKCLSHHPNPRPTMSDVVAILETLQGFDDVFIGPFVYVAVSEGRKEA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0710 383 CDD STKc_IRAK 86 360 - -
Lele28g0710 383 FunFam Serine/threonine-protein kinase BIK1 46 162 - -
Lele28g0710 383 Gene3D Phosphorylase Kinase; domain 1 42 162 - -
Lele28g0710 383 SUPERFAMILY Protein kinase-like (PK-like) 56 358 IPR011009 -
Lele28g0710 383 PANTHER OS01G0588500 PROTEIN-RELATED 48 361 - -
Lele28g0710 383 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Lele28g0710 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Lele28g0710 383 ProSiteProfiles Protein kinase domain profile. 80 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0710 383 Gene3D Transferase(Phosphotransferase) domain 1 163 366 - -
Lele28g0710 383 FunFam Probable serine/threonine-protein kinase PBL8 163 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0710 Lele-ChrLele28 4531761 4533277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0710 66 357 Glycoside Hydrolase AT3G07070 54.237 3.44e-105 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele28g0710 PK_Tyr_Ser-Thr 2.4e-48 CL0016