Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0700 ATGAAGAGGCCGCCCGCCCGAGTTGTGGGTGCCCTCGTCTTCTATTGCTATGTGATTCTATGTTTGAAGCTGAGCTTCTCAGAAGGCAACACCAGATCAGTGCCTGTGAAGGTGGGACTTGTTCTTGATCTTTCCCAGATAACTGGTAAGATCGGATTCAGCTCCATCAACATGTCCCTCTCTGACTTTTATTCCTCTCATTCTCACTACAACACCAGGCTCGTTCTCCATGTCAGAGACTCCCACACAGGTGCCATTGCTGCAGCATCTCAAGCTATAGATCTCATAAAAGTAGAGAAAGTGCAAGCCATAATCGGACCCCTTACGTCAATGGAAGCTAACTTTGTGATCAGTCTTGGAGACAAAGCTCATGTGCCCATCGTAACATTTTCGGCTACGATTCCTTCTCTTGCTTCGCTTCGGAGTCCATATTTCTTTCGAGTTTCACAAAACGATTCATCTCAAGTGAAAGCCATCGCTGCAATCGTACAAGCTTTTGGGTGGAAAAAAGCAGTGCCCATTTACGTAGACAACGATTACGGCAAGGGGATCGCACCCTTCTTGACTTATACTCTACAACAATCGTACGTTCAAATCCCATATCTCAGTGCCATCTCTCCTTCAGCCACAGATGAAGACATCAGAGGAGAGCTTTACAAGTTGATGACCATGCAAATCAGAGTGTTCGTTGTTCACATGTCAGCAAATCCTGGCGCTCTTCTCTTCAACATAGCAAATGAGATTGGTATGATGAACGAAGGCTATGTTTGGATCGTCACCGATGGTTTGGGTAACGAGATGAATTCCTTGGACTCCTCAGTGATAGATTCAATGCAAGGAGTTCTTGGTGTGAGGACCTATGTTCCGATAACAAAACGGCGTGACGATTTTAAAGTTCGATGGAGAAGAAAATTCGTACAAGACAATCCCACCCTTTTTGATACAGATTTGAATGTTTTTGGAAAATGGGCTTATGATGCTGCCACCGCATTAGCTGTGGCTGTTGAGAAGACCGGCACCAACAATCTGGGCTTTGATATGAACAATGCTTCGGGCAATAATTTGGCTGATCTTGAAAACTTGGGAGTTTCCCGGAATGGGGAAAAGCTTCGTGAGGCCTTATCAGACACTAGATTCAGTGGCATCAGTGGAGAGTTTAGTGTTATTGACGGGCAATTGCAAGCATCGACATTTGAGATAATCAACGTTAACGGTAATGGAGAAAGACAGGTAGGATTTTGGACACCAGACAAAGGAATAACAAGGGATCTGAATTTCACAAGCACGAGCACATATTCTACTTCTAGAAATAATCTGAAGCAAATCATATGGCCAGGAGATACAACATCTCTTCCAAAGGGTTGGCATCACCCTACAAATGAGAAAAAACTGAGGATAGGAGTTCCAGTGAAGAAGGGTTTTACTGAATTTGTGAAGATTTCACATGATCGCAGCACCAACAGAACAGATGTCACTGGATTCAGCATAGACGTATTTAAGGCAGTTCTGGAAGTTTTGCCTTACGCAGTCCCTTACGAATTTTTCCCATTTGCAAAACCCGATGGAGAACCTGCAGGAACATACGATGAACTGATCAACCAAATTTCTTATGGGAATCTTGATGCGGTTGTTGGAGATACGACAATTACTGCCGACAGGTCGAATGAAGTGGACTTCACTATGCCATACACAGAATCTGGCGGAACCATGATTGTTCTATTAGTAGAACATAAGCACAAGAGTCCATGGGCTTTCTTGAAGCCATTGACGTGGGATCTGTGGGTAACCATAGCTTTTTCCTTCATGTTTATTGCCTTCGTCGTATGGGTGCTTGAACATCGAATAAACGATGCGTTCCGAGGACCTCCCTCTCAGCAGATTGGCACAAGCTTATGGTTTTCATTCTCAATCTTGGCGTTTGCCCATCGGGAGAAAATAGTGAGTAACTGTGCTAGATTTGTGGTGATAGTGTGGATCTTGGTAGTTCTTATTTTGATCCAAAGCTACACGGCAAGCTTGACTTCAATCTTAACTGTTCAACAGCTGCGTCCAAGTTTTACAGATGTGAACCAATTGATGAAGAATAAGTTGAATGTGGGCTACCACAGAGGTTCTTTTATGCATGGGATATTGAAAAATATGGGATTTCAAGATTCCCAACTCATTCCTTATCACTCTGCAGAATACTGTGACGAACTGTTTACACTCGGAAGTGCCAAGGGTGGCATTGACGCTGCTTTTGACGAAATGCCCAATGTGAACCTGTTTCTTGCAACTTTCTGCTCCAAGTATGCTTCCACAGTTCCACCTACTTTTAGAACCGATGGCTTTGGTTATGTGTTCCCTAAAGGGTCTCCTCTGGTAGCAGACATATCAAGGGGAATCCTAAATGTGACTCAGGGAGATAAAATGAAAACAATAGAGAGCGCATGGTTCAAGAGTATTTATTGTCCAGATAAGGATGCTTCAGTTTCTTCTGATAATCTAAGCCTCGATAGTTTCTGGGGCCTCTTCTTCATTGCAGGGCTTGCTTCAGTTTCAGCTCTCTTCATATTTGCAGTCGCATTCCTACATCAGCATAAGCATATCTGGCACCCCAGTTCATCTTACTCATCATCATCATCAATATGGAAACGAATCACTGCGTTGCTTAAAGTGTTTGACGACAAAGACTTGAGCTCCCACAGATTCAGAAAGGGTCATGGATCCGCTGCAACTGAGTGCTCTCCAAGCCCTCACTGCCCACCAAGTCCGTCCAGTCAAACGGAATCAAACTTCTCGTTTTCAGTAGAACATGGAAACGTTAATCCATTTGGAGATTCGGCTCAAGATATTGAGATGAGCATGGTGCATTATTCTCCACCTTCACCCTCACCATTAAGTAGTCCATCAAATAACTGA 2901 0.4378 MKRPPARVVGALVFYCYVILCLKLSFSEGNTRSVPVKVGLVLDLSQITGKIGFSSINMSLSDFYSSHSHYNTRLVLHVRDSHTGAIAAASQAIDLIKVEKVQAIIGPLTSMEANFVISLGDKAHVPIVTFSATIPSLASLRSPYFFRVSQNDSSQVKAIAAIVQAFGWKKAVPIYVDNDYGKGIAPFLTYTLQQSYVQIPYLSAISPSATDEDIRGELYKLMTMQIRVFVVHMSANPGALLFNIANEIGMMNEGYVWIVTDGLGNEMNSLDSSVIDSMQGVLGVRTYVPITKRRDDFKVRWRRKFVQDNPTLFDTDLNVFGKWAYDAATALAVAVEKTGTNNLGFDMNNASGNNLADLENLGVSRNGEKLREALSDTRFSGISGEFSVIDGQLQASTFEIINVNGNGERQVGFWTPDKGITRDLNFTSTSTYSTSRNNLKQIIWPGDTTSLPKGWHHPTNEKKLRIGVPVKKGFTEFVKISHDRSTNRTDVTGFSIDVFKAVLEVLPYAVPYEFFPFAKPDGEPAGTYDELINQISYGNLDAVVGDTTITADRSNEVDFTMPYTESGGTMIVLLVEHKHKSPWAFLKPLTWDLWVTIAFSFMFIAFVVWVLEHRINDAFRGPPSQQIGTSLWFSFSILAFAHREKIVSNCARFVVIVWILVVLILIQSYTASLTSILTVQQLRPSFTDVNQLMKNKLNVGYHRGSFMHGILKNMGFQDSQLIPYHSAEYCDELFTLGSAKGGIDAAFDEMPNVNLFLATFCSKYASTVPPTFRTDGFGYVFPKGSPLVADISRGILNVTQGDKMKTIESAWFKSIYCPDKDASVSSDNLSLDSFWGLFFIAGLASVSALFIFAVAFLHQHKHIWHPSSSYSSSSSIWKRITALLKVFDDKDLSSHRFRKGHGSAATECSPSPHCPPSPSSQTESNFSFSVEHGNVNPFGDSAQDIEMSMVHYSPPSPSPLSSPSNN 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0700 966 Pfam Bacterial extracellular solute-binding proteins, family 3 490 813 IPR001638 -
Lele28g0700 966 MobiDBLite consensus disorder prediction 902 966 - -
Lele28g0700 966 Gene3D - 153 318 - -
Lele28g0700 966 Gene3D - 583 712 - -
Lele28g0700 966 FunFam Glutamate receptor 582 712 - -
Lele28g0700 966 Pfam Ligand-gated ion channel 814 844 IPR001320 GO:0015276|GO:0016020
Lele28g0700 966 SUPERFAMILY Periplasmic binding protein-like I 35 446 IPR028082 -
Lele28g0700 966 FunFam Glutamate receptor 363 462 - -
Lele28g0700 966 FunFam Glutamate receptor 463 582 - -
Lele28g0700 966 Gene3D - 368 465 - -
Lele28g0700 966 SMART GluR_14 463 814 IPR001320 GO:0015276|GO:0016020
Lele28g0700 966 MobiDBLite consensus disorder prediction 918 936 - -
Lele28g0700 966 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 874 - -
Lele28g0700 966 CDD PBP1_GABAb_receptor_plant 37 424 IPR044440 -
Lele28g0700 966 Gene3D - 744 819 - -
Lele28g0700 966 PIRSF IGluLR_plant 6 943 IPR017103 -
Lele28g0700 966 Gene3D - 466 582 - -
Lele28g0700 966 SUPERFAMILY Periplasmic binding protein-like II 442 814 - -
Lele28g0700 966 CDD GluR_Plant 462 812 - -
Lele28g0700 966 FunFam Glutamate receptor 155 315 - -
Lele28g0700 966 Pfam Receptor family ligand binding region 55 406 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0700 Lele-ChrLele28 4456407 4459663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0700 5 923 Ion Channels AT2G29120 49.196 0.0 867