Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0699 ATGTTTGAGATATTGAATGTGATTAGGAATGGGGGAAGAGCGATTGGGTTTTGGACAGCACAAAACGGAATAGTCAGAAATCTAGAGTCAACTAACAACACCAAAATGTATTATTCTACATCAAGTAAGGATCTAGGTTCAATTATATGGCCAGGGGACACGGACTCTGTTCCAAAGGGGTGGGAAATTCCCACGAATGCGAGGAAGTTAAGGAAAGGGGTATCTGTGAAAAATGGTTATCCTGAATTCGTCAAGGTATCTCATGACCCCATCACTAAAAAAACAGAGGTCACTGGATTTTGCATTGATGTGCTCAAAGCAGTTTCGGAGGTTCTCCCTTATGGCTTAACCTATGAATTCATCCCTTTTGCCAAACCAAATGGCGACAGTGCAGGATCATACAATAATCTCATCAGCCAAGTTTATTTTGGGGGATTGAATGGTAATACTACAGGAGAAAAAGTAGTGAGCAACTTGGGTAGATTGGTGGTGAGTATATGGGTTTTTATGGTTCTAATTCTGGTTCAAAGCTACACTGCTAGTCTGACGGCACTTTTGACTGTTGAGCAGCTCAACCCAACTGAAACTGACTTTAATTTACTGATAAAGAAGAGAATGAATGTCGGTTACAAGAAAGGTTCGTTTGTGCGTGAAGTCTTGAAGGAAATGGGTTTCCTTGATTACCAATTTAAAACATATAAATCCACAGAGGAATGCAACGAATTGTTTGCAAGAGGAAGTGAGAATGGCGGCATTGCAGCTGCATTTGATAAAGTGCCATACGTGGTGAAATTCTTTCTTCAAAGTTATTGTTCTAAGTATGGCATGGTGGAACCAACTTTCAAAACTGGCGGCTCTGGATTTGTGTTCCCTAAAGGTTCTCCTCTTGTGGCTGACATATCAAGGGCAATCCTGAATGTTACACTAGGAGATAAAATGAAGGTGATAGAGAATGCTTGGTTCAGAAAAAACAAGTGCCCAGGGGTTGCTTCTGCTCTAGCTCTGATTGTCTTCTTCGTTAACTTCCTATATAAGCGCAGACAAATCTGGTTACAGCATGATATATGTAAAGTTGAGGCATCTCCACGTACAAATTGCCCTCGATCTGAACCAGAATCAAGTTTCTCATTCTATAGTGAGGCTAGCCCGTATAGGCCTGTACCACAAGACATAGGCTCGTCTTCATCGTCAGGGACTCCCAGAGGGACATCGTTACTGCTGCTGCTCGAGGTTCTCTTCTCTTCTCCATGA 1251 0.4197 MFEILNVIRNGGRAIGFWTAQNGIVRNLESTNNTKMYYSTSSKDLGSIIWPGDTDSVPKGWEIPTNARKLRKGVSVKNGYPEFVKVSHDPITKKTEVTGFCIDVLKAVSEVLPYGLTYEFIPFAKPNGDSAGSYNNLISQVYFGGLNGNTTGEKVVSNLGRLVVSIWVFMVLILVQSYTASLTALLTVEQLNPTETDFNLLIKKRMNVGYKKGSFVREVLKEMGFLDYQFKTYKSTEECNELFARGSENGGIAAAFDKVPYVVKFFLQSYCSKYGMVEPTFKTGGSGFVFPKGSPLVADISRAILNVTLGDKMKVIENAWFRKNKCPGVASALALIVFFVNFLYKRRQIWLQHDICKVEASPRTNCPRSEPESSFSFYSEASPYRPVPQDIGSSSSSGTPRGTSLLLLLEVLFSSP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0699 416 SUPERFAMILY Periplasmic binding protein-like II 47 324 - -
Lele28g0699 416 MobiDBLite consensus disorder prediction 362 381 - -
Lele28g0699 416 Pfam Ligand-gated ion channel 142 174 IPR001320 GO:0015276|GO:0016020
Lele28g0699 416 Gene3D - 1 68 - -
Lele28g0699 416 Gene3D - 69 149 - -
Lele28g0699 416 MobiDBLite consensus disorder prediction 366 380 - -
Lele28g0699 416 Pfam Bacterial extracellular solute-binding proteins, family 3 175 322 IPR001638 -
Lele28g0699 416 Gene3D - 202 325 - -
Lele28g0699 416 CDD GluR_Plant 68 321 - -
Lele28g0699 416 SMART GluR_14 69 323 IPR001320 GO:0015276|GO:0016020
Lele28g0699 416 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0699 Lele-ChrLele28 4451599 4453538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0699 153 348 Ion Channels AT2G29120 50.909 1.64e-60 209