Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0685 ATGGGAATATATCTAAGCACTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAGAATGACCATCTTGGATATGGTTTATCATCCATGCAAGGGTGGCGTGCAACGATGGAAGATGCTCATGCTGCATATACAGATCTTGATGCGTCCACTTCATTTTTTGGTGTTTATGATGGGCATGGAGGTAAGGTTGTTGCAAAGTTTTGTGCTAAGTATCTTCACCAACAGGTGGTTCCTGTGTTCTTTATTCCACAAGTTCATGACCCAGATATATTTCATGTATGCTTGTGTGCTGTTAGTCTTGGTTATACTATTCAAACTTTTGTTTTGAACGAAAATTCATTTCCTAATTCTTCTTCTAGTCTAGTAACTGTCATTTCAATAAACAAAGATGGGAAGGTTGCTTTGGTCTCATTCTCCAAAATGGATGAGATGATGCGCGGTCAAAGGGGATGGAGGGAATTAGCTGTCTTAGGTGATAAGATAAACAAGTTTACTGGGATGATAGAAGGACTGATTTGGTCTCCACGAAGCAGTGATGGTAATGACCAGGTTGATGATTGGGCTTTTGAGGAGGGACCTCATTCTGATTTTGCGGGGCCTACTTCAGGAAGCACTGCCTGTGTTGCAGTAATTAGAAACAACCTACTTCTTGTTGCAAATGCTGGGGATTCAAGATGTGTGATATCCAGGAAGGGTCAGGCGTACAATTTATCTAGGGACCACAAACCTCATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCACGCAGGGCGAGTTAATGGCAGTTTAAATCTTGCAAGGGCTATAGGTGACATGGAATTTAAACAAAATAAATTTCTGCCTGTTGATAAACAAATTGTGACTGCCAATCCCGATATAAACACTGTGGAGCTTTGTGATGAAGATGAGTTTTTAGTGCTAGCATGTGATGGAATATGGGATTGCTTATCAAGCCAGCAATTGGTAGATTATGTGCATGAACAACTGCTCTCGGAAACGAAACTCTCAACCGTATGTGAGAGAGTACTTGATCGGTGTTTGGCACCATCAATTGTTGGAGGTGAGGGATGTGATAACATGACAATGATCTTGGTGCAATTCAAGAAACCCACCCGGTCTACTGAAGTAGCAGCAGAGCAATCACCTTCAAACGAACAAGCTGAATCTGAACCAAAACCAGAGGAAAGCCAAATCTAA 1212 0.4117 MGIYLSTPKTEKFSEDGENDHLGYGLSSMQGWRATMEDAHAAYTDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVVPVFFIPQVHDPDIFHVCLCAVSLGYTIQTFVLNENSFPNSSSSLVTVISINKDGKVALVSFSKMDEMMRGQRGWRELAVLGDKINKFTGMIEGLIWSPRSSDGNDQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNLLLVANAGDSRCVISRKGQAYNLSRDHKPHLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPVDKQIVTANPDINTVELCDEDEFLVLACDGIWDCLSSQQLVDYVHEQLLSETKLSTVCERVLDRCLAPSIVGGEGCDNMTMILVQFKKPTRSTEVAAEQSPSNEQAESEPKPEESQI 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0685 403 CDD PP2Cc 23 372 IPR001932 -
Lele28g0685 403 Pfam Protein phosphatase 2C 23 74 IPR001932 -
Lele28g0685 403 Pfam Protein phosphatase 2C 196 354 IPR001932 -
Lele28g0685 403 SMART PP2C_4 11 370 IPR001932 -
Lele28g0685 403 MobiDBLite consensus disorder prediction 378 392 - -
Lele28g0685 403 MobiDBLite consensus disorder prediction 378 403 - -
Lele28g0685 403 PANTHER PROTEIN PHOSPHATASE 2C 20 371 IPR015655 GO:0004722|GO:0006470
Lele28g0685 403 SUPERFAMILY PP2C-like 3 374 IPR036457 -
Lele28g0685 403 Gene3D - 1 373 IPR036457 -
Lele28g0685 403 ProSiteProfiles PPM-type phosphatase domain profile. 23 372 IPR001932 -
Lele28g0685 403 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0685 Lele-ChrLele28 4377942 4382860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0685 1 378 PP2C-type Phosphatase Gene Family AT2G25070 67.725 0.0 532