Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0672 ATGGCATTGTTCCGGAAGTTCTTTTATAAGAAGCCACCAGATGGGCTTTTAGAAATATCCGAAAGTGTTTATGGTACGTTTTTCTATTTGCTTATTTTGCATATGCATCGGTTGTTCAAAGTAGTGAAGTCTTCTTTATGCATTAGTGATGCTGGCTTTCCAGTATTTCTGGGTGATTCTGCAAGTTCTTGTGCAGACACGGGACATATGTTGTATTCAAAACATACTAGGGCTTCTTCAAATAATGCAGTGATGTATCACCAACTATCTATAAGAAATGAAATGCGATCTTCTGAAGAATTCTCCGAGACTGGTGACTTCTTTGATTACTGCTTTAGCACGGATGTTGTGGAGGAAGAAGAATATAAAGTTTATATATTGGGAATTATTGGGCTGCTTCATGATCCCTTCCCTGAGTCTTCATTTATGGTGTTTAACTTTCGGGAGGGCGATCATCAAAGCCAGATAGCTAGCATTTTGTGTGACTATGACATGACTATAATGGAATATCCTCGACAGTATGAAGGTTGTCCGATTCTCACCATGGAGACAATCCACCACTTCATAAGATCAGGGGAAAGTTGGTTTCAACTAGGGCAAAATAATATTATCTTGATGCATTGTGAACGAGGTGGGTGGCCAGTTTTAGCATTCATGCTGTCTGCTCTCTTGATCTATAGGAAGCAGTATATAGGGGAGCAAAGAACCTTAGACATGATATATAAGCAAGCGCCTCGCGAACTTTTGCAGTTAATGTCCCCATTGAATCCTTTACCTTCGCAATTGAGGTATCTTCAGTATGTATCAAGAAGAAATGTAGGTGCACAATGGCCACCTCTAGATAGAGCACTTACATTGGATTGTGTTATTATGAGATTAATTCCTAATATGGATGGAGAGGGAGGTTGCCGTCCTATATTTAGAATATATGGACAGGACCCTTTTATGGCTGCTGATCGGGCTCCCAAAGAATGTGAACTTGTAAAGATTGACATACATTGTCATGTTCAAGGCGATGTTGTTCTTGAGTGTATTAGTCTGGATAGTGATTTGGAACGTGAGGATATGATGTTTCGTGTCATGTTTAATACAGCATTCATCCGATCGAATATTTTGATACTTAACCGTGACGAAATTGACACATTATGGAATAGTGAAGACCAATTTCCGAAAGATTTTAGAGTAGAGATTCTCCTCTCAGACATGGATGCTGCTTCTTCTGTTATTTCAATTGATATGCCTCAGATTGAGGACAAAGAAGGCCTTCCTATTGAAGCATTTGCCAAGGTTCACGAATTTTTCAGCAATGTTGATTGGTTAGACTCAAAAACAGAGGTAGTGAATGTGCTCCAGCAGATCACAGCATCAAATAAGCTCCAGGAAATATTGGACAGTGGAGTTTCTGCAACACCAAGCAACTTGCTAAAGGATTCATTGTCTGGAATATCTAAATTTGATCCAATAACACTGCCAGAAAATGATAACAAGGTTACTACAACCTCAGGTCAGGGGAAGCAATTTATTTCCCCATTAGACCTCTCAACTGATTCAAATCTTACTAAAAAGATTATCTCATTAGGATGGAAGGCACCACTGGAAAATGATACTGAGAGTCTTACATTAATGGCTCAAGGGAATCGATCTCTTGCCTTAGAACTGGCCAAACAATCTATTCTCTCACACAAGCCTTCTGATGATGCTAATTCCTTTAAAAAGAGGATAGAAACATCAGAAACAATGGCATTGTCCAAAGACAGTAACAGGAGTCTCACACTGACTTGTCGGACTAAAGAATCTATTCCCTCATATGAGCCTTCTGCTGATCCTAATTCTCTCCAAAGGAGGATTGAACCTCAACATTTACAGGTTGCTCTTAAGTTGCCCACGCAATCCAAAATCATTTCTCCACGGATGCGTCAGGCTTCTCAATCTGCTTCAGTTTTATATTGCAGTTCTTTACAGGGTTCACCTGTACCTATATCAAGATATCCTAGTGCACCATCAGCCCTTGGAATAACAGCTTTGCTGCAGGATCGTGTTGAAGGGGATATCAAGAAAGAAGTCAATCATGGAGTTACTATGGCCCCCTCTTCTTCTACATTGTCTCGTTCTGTCTTAGAGGTGACAAAATCTGTGGACATAAGTCCTACAAGTGTTCCTCCAGTATCATCTTCAACATTGCTGCGATCTTTATCACTGAAATCTTTGATGGATGTTCCTGCAGTCACACATAACACTGTTGTGCCCCTTGGTCATGCTGTTTCTTCTCCTCCTCCTAAACCGCAGCCTACTTCAGAAATGGTGCAACCTAGTGTAATCCAGCACCCAGAAAATATATCACTTGATAAAACTAAAAAAGCATTGGTTTCTCCTCCTACTCCTACACCTCAACCTCAGTCTCAGCCTACTTCAGAATTGACGCAACCTGCTGTCACCCAACACCCTGAGAATATAGTGCATGACAAAGGTGAAAGGTCATTAGTTTCTCCTCATCAACCTCAGCTTTCTTCAGAATTGATGCAACCTATTTTCTACCAGCAGCCTGAAAATACAACGCATGATAAAAGTAAAAAGTCATTAGTTTCTCCTCCTGCACCTCCGCCCCCACCTCCTCACTCAACTGTAGCTCCTCTTCTGCCACCGTCCACAAAGAGTACATTGCCAACCCTTCCTGCGCCCACTCCACCCCCTCCACCACCTCCCACTGTAAAAAGTTCATTTGCATCTCCCCTTCTCCATCCCTCACTTCCTCACCCAACAACTGTTCCTCTTCCTGCGTCTTCCATGAATAGCTCATTTTCACCCCCTCCTTCACCAGCTCCAGCCCCTCCACATTCCACTTCAGAATATTCACTCAAAGCTCTCCCTCCTCCACCTCCACCTCTACCTTCAACTTCTAAGACCTTTTCAATTCCTCCCCCTCCACTCTCTGGGATTCCTTCTTCAGCTGCCCATTTTAATCCTTCTCCACTGAATATGAACAATTCTGCTGCTACCTCTGGCCCCCCACCCCCACCCCCACCTCCTGGGTATTCTGGAACCATGTCTGGTCCTACTCTTACATCAACAGTGCTGCCGCCACCCCCACCACCTACTTCTACCACAACTTTGACAAAGAACTCTGATACTGCTCCACCTGTACCTCCTCCCTCTTCTGCTAATGGGACTCTGCACCCTGGCACTGGTAATGGACATGTACCTCCAGCTCCTGGACCGCCTAGTTTTCCTTTTGGTGCAAAGGGACGTGGCTTGTCACGACTAAATGTAAAAACTCAAACTAAAAGGGGCAATCTGAAACCTTACCATTGGTTAAAATTAACAAGGGTCATGCATGGAAGTTTATGGGCTGAGACACAGAAGCCTGAGGAAGCTTCTAAGTATGAGAACTGTGCTAAACCTTTTCTGGATTTAGCTACTCCAAATTCTGATAGTGGAGGCAAAGGAGGACCATCCAATTATCGTGGCTCGGGGACTAAAACTGAGAAAGTTCAGCTGATTGAGCTAAGGCGGGCATATAATTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCAGATTTAATGAGCTCTGTGCTTGCTTTGGATGAGTCAGCATTAGATGTCGATCAGAACTACAGTGGAGATAATGACAACTTAGGAAGGTGTGAACAGTTGTTCTTGGAATTGATGAAGGTTCCAAGAGTAGAAAGCAAGTTAAGAGTGTTCTCTTTTAAGATACAATTCCACACTCAGGTTTCTGAGCTCAGAAGGGACTTGAATATAATAAACTCTGCATCTGAAGAGATCAGGAATTCAGTCAAGTTGAAAAGAATTATGCAGACCATTCTTTCTCTTGGTAATGCTTTGAACCACGGAACTGCAAGAGGTGAGTTAAAGCTTATGCTTTTACCATCAAAAAGTGTGAGTGCTGCTATTGGGTTTCGATTGGACAGTCTCCTTAAGCTCACCGATACGCGGGCCAGGAACAACAAAATGACTCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTCTCAAAAGACCTAGAGAGCTTGGAGGCTTCAACGAAGATACAATTGAAATATTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTTGAGAAAGTAGTTCAGGAATTGACTGTGTCAGAGAATGATGGGCCTGTATCAGAAAATTTCTGCAAGATTTTAAAGGAATTTCTTAGCGATGCTGAAGCCGAAGGTAGAAACGCTGATGCATTAGCTCAATACTTTGGAGAGGATCCTGCACGTTGCCCATTTGAACAAGCCCATGAAGATAACCGCAAGCAGCTCGAATTGGAGAAAAAGAAAGCAATGAAGGAAGCAGAAAATGAGAAGTTGAAGTTGACTCCTAAGAAGGAGTCTGAGCAAACCATACGAACCCCCATTGAGAGTGGCAAACTTAAGTGA 4437 0.4246 MALFRKFFYKKPPDGLLEISESVYGTFFYLLILHMHRLFKVVKSSLCISDAGFPVFLGDSASSCADTGHMLYSKHTRASSNNAVMYHQLSIRNEMRSSEEFSETGDFFDYCFSTDVVEEEEYKVYILGIIGLLHDPFPESSFMVFNFREGDHQSQIASILCDYDMTIMEYPRQYEGCPILTMETIHHFIRSGESWFQLGQNNIILMHCERGGWPVLAFMLSALLIYRKQYIGEQRTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVGAQWPPLDRALTLDCVIMRLIPNMDGEGGCRPIFRIYGQDPFMAADRAPKECELVKIDIHCHVQGDVVLECISLDSDLEREDMMFRVMFNTAFIRSNILILNRDEIDTLWNSEDQFPKDFRVEILLSDMDAASSVISIDMPQIEDKEGLPIEAFAKVHEFFSNVDWLDSKTEVVNVLQQITASNKLQEILDSGVSATPSNLLKDSLSGISKFDPITLPENDNKVTTTSGQGKQFISPLDLSTDSNLTKKIISLGWKAPLENDTESLTLMAQGNRSLALELAKQSILSHKPSDDANSFKKRIETSETMALSKDSNRSLTLTCRTKESIPSYEPSADPNSLQRRIEPQHLQVALKLPTQSKIISPRMRQASQSASVLYCSSLQGSPVPISRYPSAPSALGITALLQDRVEGDIKKEVNHGVTMAPSSSTLSRSVLEVTKSVDISPTSVPPVSSSTLLRSLSLKSLMDVPAVTHNTVVPLGHAVSSPPPKPQPTSEMVQPSVIQHPENISLDKTKKALVSPPTPTPQPQSQPTSELTQPAVTQHPENIVHDKGERSLVSPHQPQLSSELMQPIFYQQPENTTHDKSKKSLVSPPAPPPPPPHSTVAPLLPPSTKSTLPTLPAPTPPPPPPPTVKSSFASPLLHPSLPHPTTVPLPASSMNSSFSPPPSPAPAPPHSTSEYSLKALPPPPPPLPSTSKTFSIPPPPLSGIPSSAAHFNPSPLNMNNSAATSGPPPPPPPPGYSGTMSGPTLTSTVLPPPPPPTSTTTLTKNSDTAPPVPPPSSANGTLHPGTGNGHVPPAPGPPSFPFGAKGRGLSRLNVKTQTKRGNLKPYHWLKLTRVMHGSLWAETQKPEEASKYENCAKPFLDLATPNSDSGGKGGPSNYRGSGTKTEKVQLIELRRAYNCEIMLTKVKIPLPDLMSSVLALDESALDVDQNYSGDNDNLGRCEQLFLELMKVPRVESKLRVFSFKIQFHTQVSELRRDLNIINSASEEIRNSVKLKRIMQTILSLGNALNHGTARGELKLMLLPSKSVSAAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFSKDLESLEASTKIQLKYLAEEMQAISKGLEKVVQELTVSENDGPVSENFCKILKEFLSDAEAEGRNADALAQYFGEDPARCPFEQAHEDNRKQLELEKKKAMKEAENEKLKLTPKKESEQTIRTPIESGKLK 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0672 1478 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1101 1447 - -
Lele28g0672 1478 Gene3D Protein tyrosine phosphatase superfamily 104 273 IPR029021 -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 953 979 - -
Lele28g0672 1478 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 283 402 IPR035892 -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 1436 1469 - -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 884 905 - -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 1138 1158 - -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 1436 1478 - -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 999 1013 - -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 982 998 - -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 1144 1158 - -
Lele28g0672 1478 ProSiteProfiles C2 tensin-type domain profile. 281 402 IPR014020 -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 930 944 - -
Lele28g0672 1478 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 144 269 IPR029021 -
Lele28g0672 1478 PANTHER FORMIN-J 1 1465 - -
Lele28g0672 1478 Pfam C2 domain of PTEN tumour-suppressor protein 282 400 IPR014020 -
Lele28g0672 1478 Gene3D Formin, FH2 domain 1107 1469 IPR042201 -
Lele28g0672 1478 SMART PTEN_C2_2 279 401 IPR014020 -
Lele28g0672 1478 Gene3D - 278 405 - -
Lele28g0672 1478 PRINTS Proline rich extensin signature 790 802 - -
Lele28g0672 1478 PRINTS Proline rich extensin signature 919 944 - -
Lele28g0672 1478 PRINTS Proline rich extensin signature 859 880 - -
Lele28g0672 1478 PRINTS Proline rich extensin signature 880 896 - -
Lele28g0672 1478 PRINTS Proline rich extensin signature 897 914 - -
Lele28g0672 1478 Coils Coil 1430 1459 - -
Lele28g0672 1478 Pfam Formin Homology 2 Domain 1090 1204 IPR015425 -
Lele28g0672 1478 Pfam Formin Homology 2 Domain 1204 1415 IPR015425 -
Lele28g0672 1478 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1088 1466 IPR015425 -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 849 1093 - -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 750 769 - -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 861 877 - -
Lele28g0672 1478 SMART it6_source 1086 1473 IPR015425 -
Lele28g0672 1478 MobiDBLite consensus disorder prediction 787 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0672 Lele-ChrLele28 4312294 4320021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0672 595 687 FH2 protein (formin) Gene Family AT2G25050 40.426 1.40e-10 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0672 28 4312294 4320021 Lele01g0681 01 4007951 4010680 CCT
Lele28g0672 28 4312294 4320021 Lele02g0669 02 4022882 4025389 CCT
Lele28g0672 28 4312294 4320021 Lele03g0676 03 4005715 4013557 CCT
Lele28g0672 28 4312294 4320021 Lele04g0683 04 4160702 4162016 CCT
Lele25g0683 25 4318386 4326138 Lele28g0672 28 4312294 4320021 hybridization
Lele26g0688 26 4399727 4406749 Lele28g0672 28 4312294 4320021 hybridization