Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0670 ATGGAACCAACGTGCGAGAACACCCTTCTCAGCCTCAACGTTAGCCCTTCTCGGCACGTGGACGGTGTCCCGGTTCGTTCATACAAACCTAACCTCAAATATATCACTCTGTGTTCTCTTGTTCTTCAATTTTTTGATTTGTTAATGTTGGAAAATTGTTTTAAATTGCGCAAGCAGGCCGAGGTTTTGATGATGGAAGAGTTGCATCGTTTAAGTAGCGAGAAAAAGATGCTAACTGAGAAGCTTAGTCGTGTGACTGAGAGCTACAGTGCTCTGCAAAAGCATTTTAACCAAGTGCTCAAGAACACCAATTCTCAGTTGGACTTAAGTACAGTAGTAGAACAATCAAGGAAGAGAAAGGCTGAAACCGATCATCAGAGTTGTATCATCACTAATAACAATAAGTTTAATTTTAGCAGCGCTTCCGAGTGCAGCACCGGCACTGAGGATTATTCATTCAAGAGGCCCAAGGATCACACGTGTCTCACTCACCCTGTTTCTCCCAAGTCTTCGAAGGTTGTTGTGCGCACGCACGCATCTGATCCCAGCTTATACGTGAGAGATGGATATCAGTGGAGGAAATATGGTCAGAAGGTCACAAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCCCCTAGCTGCCCAGCGAAAAAAAAGGGGGCTCAAAGTGAAAGGCTGAGTGTGAATGTTGAGGAGAAATCCGGGCACGAGTATTTGGCTCAACAAATGGCTTCTTCTTTGTCAAGGGATCCCATTTTCACATCAGCTCTTGCTTCTGCCCTTTGTGGAAGAATTTTAGACCACAGTACTGTTCCCTAG 831 0.4489 MEPTCENTLLSLNVSPSRHVDGVPVRSYKPNLKYITLCSLVLQFFDLLMLENCFKLRKQAEVLMMEELHRLSSEKKMLTEKLSRVTESYSALQKHFNQVLKNTNSQLDLSTVVEQSRKRKAETDHQSCIITNNNKFNFSSASECSTGTEDYSFKRPKDHTCLTHPVSPKSSKVVVRTHASDPSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPAKKKGAQSERLSVNVEEKSGHEYLAQQMASSLSRDPIFTSALASALCGRILDHSTVP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0670 276 SMART WRKY_cls 186 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g0670 276 ProSiteProfiles WRKY domain profile. 188 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g0670 276 SUPERFAMILY WRKY DNA-binding domain 184 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g0670 276 Pfam WRKY DNA -binding domain 188 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g0670 276 Coils Coil 68 88 - -
Lele28g0670 276 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 62 223 IPR044810 GO:0003700
Lele28g0670 276 Gene3D WRKY domain 171 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0670 Lele-ChrLele28 4305538 4306940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0670 63 273 WRKY Transcription Factor Family AT2G25000 35.484 2.06e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele28g0670 WRKY 1e-14 CL0274