Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele28g0666 | ATGGTGGAATATGGCTTCTGGGAGTTCATTAAAGCCAAATGCTTTGAACTAAACAGAACGAAGGGACTCCGAAAAGAGGACTTTGAAATTTGTACTGTCCCTTCAACAGCATTGAAGGAGGAAGATGGCAATCATACAAAAGCGAAAGGTATAGTATCTTGGCTTAGAAAAGAGGTCAGCGACTTTGATGTCGCCGAGAGTGCAAGCAAACGAACCGTTATCATGAGAGCACCAACAAACCAGAGTGTCACAGGAACATGTTTCGAATTCTTCTCAACAAGGTGCTGCCCTCTCCGTACCGAGCACTGTGAAATAGAAGCGATAATAATAATAATAGAATGGCAATGTAGGTCACCGTTACGCCGGAAAATGGCACAGTATCACCGGAGCAACGTCGGATCTCTGGTTCTCGACCATCACGATCCTACCAGGAATGCAACAGTCGGCGTCCACTGCCGCATATGGAATGCCTTGTCCGCTTCAACAATACGCCGCATCATTTTTGACGCTGTCAGCTGTGGCGGCGGCTCTCGGCATCACCGCCACCACCGTAATGACTTTGTCTCCACACCTTCGTCGAGTTCATCAGACTCCGGGAACTCTAAGGACAAGTCGCAAGAACAGAGACAGTGTGCTTCCAAGTCTCAGCCGAAACCAAATGCGAAGTCGGAGAAACTATCGGATCTTCTGAATATAGCGGAGTCTGAAATTGACGCCCAAACGAAGAAGAAAGAAGAGGCATTTCAGGAGTTGAAGAGAATTGTGAAGGAGTTACAGGCTGAGGATTTAACAAAGCGGCAAATGGCTGCGGCTAGCTTGAGATTGCTCGCAAAGGAAGGCTTGGAAGTCAGAGGGACACTTGCAATGCTTGGAGCGATTCCTCCCCTGGTTGGAATGCTTGATTTGGAAGACGTCAATTCTCAGATCTCTTCGCTCTATGCGTTACTCAATCTTGGAATCGGCAACGACGCAAATAAGGCAGCCATTGTCAAAGTTGGTTCTGTTCACAAAATGCTAAAGCTCATTGAATCACCAACTGATCCGGATTCATCCGTCTCTGAAGCAGTTGTTGCAAATTTCCTTGGCTTGAGTGCTTTGGATTCGAATAAACCAATAATTGGATCGTCTGGTGCGATTCCTTTCCTGTTTAGAACCCTGGAAAAATCGCATGAAAAAACTAGCCCCCAGGCTAAGCAAGATGCTCTCCGAGCACTTTACAATCTATCAATCTTCCCAGCCAACATCTCATTCATATTGGAAACGGATTTGGTTCCGTTTCTGATAAACGCAATAGGAGACATGGAAGTAAGTGAAAGAATTCTCGCGATCCTAAGCAATTTGGTACCAACTCCTGAGGGCCGAAAAGCAATAAGTGCCGTGCGAGATGCATTCCCCATTCTGGTTGATGTATTGAATTGGACAGATTCACCTGGATGCCAGGAAAAAGCATCTTATATCTTGATGATTATGGCACACAAAGCCTACGGTGACAGGCAGGCCATGATTGAGGCTGGGATTGCCTCGTCATTGCTCGAGTTGATGCTTCTGGGTACTGCCTTGGCACAGAAAAGGGCCTCGAGAATATTGGAATGCTTGAGAATAGACAAAGGGAAGCAGGTATCTGGGAGTTCTGGCGGAAACTTCAGTTCAACTGTATCTGCTCCCATTTGTGGCTCTTCGTCATCTTGTACGAAGCCAGATGGAAGTGGAGAGGAGTGTTTGGAGGAGGAGGAGGAAATGATGAGTGACGAGAAGAAGGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAAAACAACATGAGGAAAATTGTGAAAAGGGCCAATTTGCCTCAAGATTTCGTTCCATCCGACAATTTTAAGGCACTCACTTCAGGATCAACTTCAAAAAGCCTGCCATTTTGA | 1902 | 0.4627 | MVEYGFWEFIKAKCFELNRTKGLRKEDFEICTVPSTALKEEDGNHTKAKGIVSWLRKEVSDFDVAESASKRTVIMRAPTNQSVTGTCFEFFSTRCCPLRTEHCEIEAIIIIIEWQCRSPLRRKMAQYHRSNVGSLVLDHHDPTRNATVGVHCRIWNALSASTIRRIIFDAVSCGGGSRHHRHHRNDFVSTPSSSSSDSGNSKDKSQEQRQCASKSQPKPNAKSEKLSDLLNIAESEIDAQTKKKEEAFQELKRIVKELQAEDLTKRQMAAASLRLLAKEGLEVRGTLAMLGAIPPLVGMLDLEDVNSQISSLYALLNLGIGNDANKAAIVKVGSVHKMLKLIESPTDPDSSVSEAVVANFLGLSALDSNKPIIGSSGAIPFLFRTLEKSHEKTSPQAKQDALRALYNLSIFPANISFILETDLVPFLINAIGDMEVSERILAILSNLVPTPEGRKAISAVRDAFPILVDVLNWTDSPGCQEKASYILMIMAHKAYGDRQAMIEAGIASSLLELMLLGTALAQKRASRILECLRIDKGKQVSGSSGGNFSSTVSAPICGSSSSCTKPDGSGEECLEEEEEMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFVPSDNFKALTSGSTSKSLPF | 633 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele28g0666 | 633 | SMART | arm_5 | 322 | 365 | IPR000225 | GO:0005515 | |
| Lele28g0666 | 633 | SMART | arm_5 | 366 | 410 | IPR000225 | GO:0005515 | |
| Lele28g0666 | 633 | SMART | arm_5 | 453 | 492 | IPR000225 | GO:0005515 | |
| Lele28g0666 | 633 | SMART | arm_5 | 280 | 320 | IPR000225 | GO:0005515 | |
| Lele28g0666 | 633 | SMART | arm_5 | 411 | 449 | IPR000225 | GO:0005515 | |
| Lele28g0666 | 633 | MobiDBLite | consensus disorder prediction | 177 | 226 | - | - | |
| Lele28g0666 | 633 | PANTHER | ARM REPEAT SUPERFAMILY PROTEIN | 147 | 633 | - | - | |
| Lele28g0666 | 633 | Coils | Coil | 223 | 261 | - | - | |
| Lele28g0666 | 633 | Gene3D | - | 247 | 533 | IPR011989 | - | |
| Lele28g0666 | 633 | SUPERFAMILY | ARM repeat | 250 | 532 | IPR016024 | - |
Showing 1 to 10 of 11 entries
Duplication type information
Functional genes information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele01g0683 | 01 | 4016009 | 4024576 | Lele28g0666 | 28 | 4258456 | 4263795 | CCT | |
| Lele02g0671 | 02 | 4029613 | 4033130 | Lele28g0666 | 28 | 4258456 | 4263795 | CCT | |
| Lele03g0678 | 03 | 4023655 | 4027156 | Lele28g0666 | 28 | 4258456 | 4263795 | CCT | |
| Lele04g0685 | 04 | 4167101 | 4170369 | Lele28g0666 | 28 | 4258456 | 4263795 | CCT | |
| Lele25g0674 | 25 | 4256202 | 4258206 | Lele28g0666 | 28 | 4258456 | 4263795 | hybridization | |
| Lele26g0682 | 26 | 4349839 | 4351835 | Lele28g0666 | 28 | 4258456 | 4263795 | hybridization |
Showing 1 to 6 of 6 entries