Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0655 ATGCGGAAGGAACCGACGCACCAGAAAGAAACAATGAACACCAAGCTTCTTCCTTTTCTGCTTCTCCTTCTCCTTCGTCACGAACCCATTTCTGTTCATGCTGCAGCAGACCCTCCTGTTCCTGCAAGTCCTCTCCAGACTAATTCTTCAATTCCTGCATCAATGGCTGCTTCCTCCCCAGGAATTCAGGTGGAGAACAAAGAACACCAAATGGATTTACACACGAAGATGGTAATAGCTCTCGCCGTTGTAAGTACAGCACTCGTTGTAGTCATTTTGTGCTTCTTATGCTTCTGGATTTATAGTAGGAAGCATCTATCCAAATCCAACAGGAAAAGCGTTCCCAACTCAGATGCCGAGAAAGGGGTTGCGCTTGCACCTTTTTTAAGTAAATTCAGTTCTGTAAAAATGGTTGGGAAAAAAGGGTCTCTTCCAATCATTGATTATAAGCAAATAGAAAAAGCGACCAACAATTTCCAGGAAAGTAACATATTGGGGCAGGGTGGATTTGGATGTGTTTACCGGGCTCGTTTGGATGATAATCTGGATGTTGCCGTCAAGAGACTACACTGTGAAACTCGAAGTGCTGAGAGAGAATTCGAGAACGAGGTGAATTTGTTAAGTGAAATTCGACATCCAAATATAATTTCTATACTCGGTTGCTGCGAAAATGATGTCAAGAGGTTCATTGTCTATGAATTGATGCAAAACGGATCCCTGGAAGCTCAATTACACGGACCCTCTCATGGTGCGGCATTGACCTGGCACATGAGAATGAAAATTGCTCTTGATACAGCGAGAGGATTGGAATATCTCCATGAGCACCGTAAACCTGCAGTGATCCACAGAGATCTGAAAGCGTCTAATATTCTTTTAGATGAGAACTTCAATGCTAAGCTGTCTGATTTTGGGCTAGCCATAATGGATGGAACCCAAAGCAAGAGTAACATAAAGCTGTCAGGCACATTGGGATACGTTGCCCCTGAGTATCTCCTAGATGGGAAATTGACTGATAAAAGTGATGTGTATGCATTTGGGGTTGTGCTTCTGGAGCTTCTGCTGGGAAGGAAGCCGGTGGAAAAACTGTCACCGTCTCTTTGCCAATCGCTGGTGACGTGGGCGATGCCACAGCTCACGGACAGATCAAAGCTTCCCAGCATAGTAGATCCAGTAATCAAGGACGCCATGGACCCCAAGCATTTATACCAGGTAGCAGCAGTGGCTGTGCTGTGCGTGCAAGCAGAACCGAGTTACAGACCTTTGATCACAGATGTGCTGCACTCGCTGGTGCCTCTGGTTCCGGTGGAGCTGGGAGGAACTCTGAGAGTCTCATCACATGTGGCCCACCCTGTTATGGCGTGA 1362 0.4604 MRKEPTHQKETMNTKLLPFLLLLLLRHEPISVHAAADPPVPASPLQTNSSIPASMAASSPGIQVENKEHQMDLHTKMVIALAVVSTALVVVILCFLCFWIYSRKHLSKSNRKSVPNSDAEKGVALAPFLSKFSSVKMVGKKGSLPIIDYKQIEKATNNFQESNILGQGGFGCVYRARLDDNLDVAVKRLHCETRSAEREFENEVNLLSEIRHPNIISILGCCENDVKRFIVYELMQNGSLEAQLHGPSHGAALTWHMRMKIALDTARGLEYLHEHRKPAVIHRDLKASNILLDENFNAKLSDFGLAIMDGTQSKSNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLSPSLCQSLVTWAMPQLTDRSKLPSIVDPVIKDAMDPKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLVPLVPVELGGTLRVSSHVAHPVMA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0655 453 ProSiteProfiles Protein kinase domain profile. 159 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0655 453 PANTHER OS01G0750732 PROTEIN 26 432 - -
Lele28g0655 453 CDD STKc_IRAK 165 432 - -
Lele28g0655 453 FunFam probable receptor-like protein kinase At1g80640 235 434 - -
Lele28g0655 453 SUPERFAMILY Protein kinase-like (PK-like) 138 429 IPR011009 -
Lele28g0655 453 SMART serkin_6 159 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0655 453 Pfam Protein tyrosine and serine/threonine kinase 162 425 IPR001245 GO:0004672|GO:0006468
Lele28g0655 453 Gene3D Phosphorylase Kinase; domain 1 124 234 - -
Lele28g0655 453 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Lele28g0655 453 FunFam Protein kinase superfamily protein 126 234 - -
Lele28g0655 453 Gene3D Transferase(Phosphotransferase) domain 1 235 434 - -
Lele28g0655 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0655 Lele-ChrLele28 4177400 4181406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0655 64 433 Receptor kinase-like Gene Family AT3G58690 43.617 1.18e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lele28g0655 PK_Tyr_Ser-Thr 8.4e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0661 25 4159275 4161725 Lele28g0655 28 4177400 4181406 hybridization
Lele26g0670 26 4258306 4261157 Lele28g0655 28 4177400 4181406 hybridization