Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0644 ATGGCTATCAACGATGAGGTTCATGACAATGTTATCCTCGTCTTTGTGCTGCGACATTTGATGGAACACAACTTCACTGAGACTGCTCATTGCCTGGAGCGTGAAAGTGGTTTTTATTTCCACATTCCGTACTTTGAGGAGCTGATTATGACTGATCGTTACGATGAAGCTGAAGATTATGCCCTGGGATTCACTTCCGAATCATCAGGTGATGAGAAGGTATGCGCTTCCAGGAACAAGGAGACTTGTGGTGGAGGAGTTGAAGAAATGCATCAGAGAGAACCCGGCGTTTCAGGGAAAACTCAAGCTTCCTTTATCACCGACGATGGTTCAGCGTCTGATCGCGGAGAGGCAAGTAAACGGCGGGTGGAGCGTGAAAGTGGGTGCTACTTTGACAAGAAACATTTTGAGGACATGGTGCTTTCTGGGAAATTTGAGGACGCTGAGACTTATCGATCTTGTTTCCCAAATGTTGATGACAATAGAAATGATCGTTCCAAGGCTCTAGATATCCTGATAAAGGATCTCAAAGTTTTTTCCCCAGGACGCGATGAGCTTCTCAAAGAAATGACTCAGCTGTTGACAATTAATAATATAAGGGAACACGAGTCACTTCTAAACTACCAAGACACAAATTCTGTGAGGAAGATTATCTTAGAGCATCTTAAAACAATGATTGAAGAAAATCCACTGCTTAATGGAAAGCTTAAGTTTCCTGCTATAAAATCTCAGAGGTTAACTAATCTTCTAAACCAAAGCTTAAACGGGCAGCATCTTCCTTGCAATCATCCTATTCCTGAGCCTGTTACACAAACTCTCTTTGCGGACCATCTATGTAAGCTGTTCTCAAATCCTGTGTGGGGTCTTGATTATTGCATTGGTTCCTTTTTAAGATGCTCATTGATGCTGGTAGTCGATGGTGATGATGGCCTTTCTGTAGAAACGTCTGTGAAGAATGAAACACATGAGGTGCCTCGTGTGCAGGTAACATCATCGGCAGTAGAAAGTTACCTGCCCAAGAAAGTTATGACACTGAATGATGATTCGCCTCCTACTGGAATGGGTTTTCATCCTAATTGGCAAACTATTCTTCTAGCATGTTCAACCAATTTCAAGATTGAAGCTCATGATGGCAGTGTCAATGATATAGTGGTTTCTCTTGTTCGTGAGCAACTATTAGTCATAACATGTGGTGACGACAAGACAGTAAAGGCTTTTTTCACATGTGGTGTTGGCCAGGATGGAGAGCCATTTATTGTGGAATGGGATGACAGTGAAGGGTGCATAAAAAGAGTCTACGAGGGACTTAAGGCTCCATTCTCTTCCAGAATCCACTTTGATACGACGAGGAACCGATATTTGGTTGCTGGTGATGATCATATGGTTAAATATTGGTATATGGACAATGTGCAGCTATTGTTAAGCACCAATGCCGATGGGGCCTTGATGCACCCTGATTATGATGATTTGCAAATGAAAAATGAAGCTCGTTCTATTCATGCCCCTACCGTCCTGTCTGAAACCTCAGCAGAGATTGTGAGACTGATTTACCCCAGCGTGGGAAAGGCCATCTTGGCATTGGCATCAGATGGTAAAATTATACTTTGGAAATGGCCAGCGAATGAGCAATGGGTCCCAGTCCTTCCTTTGGTTATCTCCCCTGCATTTTTTTCATCTGATGGAATGGAAATATATGCCGGTTTTGTGGACGGGACTATCACAATATTAGACGCTTCAAACCTTGATCCTCTTTGCAGGATAGAGCCCACTGCTTACCTTCCCCCCACTTCAAGAGCATCTACTTACTTGCTATGGCTGCAAATCCAGCGAAGGCAGGGAAGTTTGCTTTGGGGTTTTTCAGATTGTAATGTGTATGTGATGGAGCCTCCTGAGCCAGAACTTAAGTTGTCCGCACTTTCATGTGATGATGACAAGGTGGAAGCAGAAGCCAGGGGTGTGGGAGTCGCTGAGCCTGATGAAAATTGA 1986 0.4366 MAINDEVHDNVILVFVLRHLMEHNFTETAHCLERESGFYFHIPYFEELIMTDRYDEAEDYALGFTSESSGDEKVCASRNKETCGGGVEEMHQREPGVSGKTQASFITDDGSASDRGEASKRRVERESGCYFDKKHFEDMVLSGKFEDAETYRSCFPNVDDNRNDRSKALDILIKDLKVFSPGRDELLKEMTQLLTINNIREHESLLNYQDTNSVRKIILEHLKTMIEENPLLNGKLKFPAIKSQRLTNLLNQSLNGQHLPCNHPIPEPVTQTLFADHLCKLFSNPVWGLDYCIGSFLRCSLMLVVDGDDGLSVETSVKNETHEVPRVQVTSSAVESYLPKKVMTLNDDSPPTGMGFHPNWQTILLACSTNFKIEAHDGSVNDIVVSLVREQLLVITCGDDKTVKAFFTCGVGQDGEPFIVEWDDSEGCIKRVYEGLKAPFSSRIHFDTTRNRYLVAGDDHMVKYWYMDNVQLLLSTNADGALMHPDYDDLQMKNEARSIHAPTVLSETSAEIVRLIYPSVGKAILALASDGKIILWKWPANEQWVPVLPLVISPAFFSSDGMEIYAGFVDGTITILDASNLDPLCRIEPTAYLPPTSRASTYLLWLQIQRRQGSLLWGFSDCNVYVMEPPEPELKLSALSCDDDKVEAEARGVGVAEPDEN 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0644 661 Gene3D - 345 646 IPR015943 GO:0005515
Lele28g0644 661 SUPERFAMILY WD40 repeat-like 339 626 IPR036322 GO:0005515
Lele28g0644 661 SMART Lish 8 40 IPR006594 GO:0005515
Lele28g0644 661 MobiDBLite consensus disorder prediction 86 121 - -
Lele28g0644 661 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Lele28g0644 661 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 406 483 IPR027728 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0644 Lele-ChrLele28 4102424 4109737 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0648 25 4087893 4096055 Lele28g0644 28 4102424 4109737 hybridization
Lele26g0660 26 4188328 4197768 Lele28g0644 28 4102424 4109737 hybridization