Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0633 ATGGCTAAAGAAGTCACTGCTACTCCATCAACATCTTCTTTTGACTACGTGCTCTTGGGGGATGATCATGCGAACCTAAGCGCTGTCAGAGGTACATCTGGCCACAAAAGTCCATGGATCGAACCTGAGAGGCTGAAACTTCGACACAGGATTGGCCGGGGACCGTTTGGTGATATTTGGTTAGCAACTCATCATCAGTCAACTGAAGAGTATGATGAGTACCATGAAGTTGCTGCCAAGATGTTGTATCCAATCAAAGAGGACAACTTGAGGATTGTATTAGAGAAATTTGATGAATTATATCATAAGTTCCAAAGAGCGGCTGGGGCTTGCTGGCTCCATGGAATTTCAATTTTAAACGGAAGGATATGCATCATTATGAATTTCTACGAGGGTTCTGTCGGTGACAAAATGGCTAGGCTCAGAGAAGGAAGGATTTCGTTTCATGATGTGTTGAGGTATGGAATCAATCTGGCCCAAGGTATTCTGGAACTTCATTCAAAAGGAATCCTAATTCTCAACCTTAAACCCTTCAATGTGCTTCTTGATAATAATGACCAAGCTATTTTGGGAGATTTTGGTATCCCCAATCTTCTGCTTGGCCTCTCATTCCAGGGCCCAGATATGGCTCACAGGCTGGGGACTCCAAATTACATGGCTCCAGAACAATGGCAACCTGAAGTCAGAGGCCCTATATCCTTTGAGACAGATTCATGGGGATTTGGGTGTACCATTGTGGAAATGTTAACTGGTGATCGACCTTGGTATAGAAGATCAGTTGGTGAAATATATCAATTTGTAGTTAGAAAACATGAGAAACCTCTTATTCCCAGTGGTCTTCCTCCTTCAATTGAGAATATCCTCAACGGATGCTTTGAGTATGATTTGAGGAATCGTCCCTCAATGGTGGATATTCTGAGCGTATTTAAAAGCTCTCTGGATGCGTTAGCCAATGATGGAGGATGGCAATATCTCGGAACCATGAAGGTTGCTGAAAAATCAAGTAGCACAGGCTATACCGATTGGTTTCTTTTAAAGGATCGTCTCCAGGTGAATGACATGGTAAGATCTAGAAAACCAACCAATTCATGCAAAGGTCAAAACATGGATGTCCCGGAAGGAACTATTGTTGGTTTAGAACGAAGTGCAGATCAAGGTTTTGTTTTAGTGAGGGTTCACGGTATTCATGACCCTTTAAGGATTCATAGTTCAACTCTGGAGCGTGTCACATTTGGTTTAGCAGCTGGCGATTGGGTACGCTTGAAGGAGGAAGATGAGAAGCATTCACCAGTAGGCATTCTGCATTCCATTAGCCGTGATGATAGAGTGGCTGTTGGATTTATTGGAATGCAAACTCTTTGGACGGGTAGTTCTTCAGAACTTGAAATGGCAGAGCCTTACTGTGTGGGGCAGTTTGTAAGGCTTAGAGTCAATGTTTTGAGTCCTCAATTTGAATGGCCTCATAAAAGGGGAGGGGCCTGGCCTACTGGAAGGATATCATGGATCCTACCAAATGGGTGTCTAATTGTCAAATTCCCAGGGATGTTGACTTTTGGGGATGAAGCAAGCACCTTCTTAGCTGATCCATCCGAGGTTGAAGCGGTCAACTTTAGTACTTGCCCTGGGATCATAGAGAAGTATAAACATGTAGAGGATCATCACTGGTTGGTCAGACCTGCCCTAATTGCATTTGGCCTGTTTACAGCTTTGAAATTAGGCTTGTCAATTGGAAAGAAAATGGGGAAGAACAAGGTGCACGCGAAAGAGAGCGAAAATCAGCACATAGATGCCCAGAATGCTAGCATAAATCAGCACATAAATCCTGGCAACACGGTATGGGTTCCTGCAGTTTCCAATATTCTTTTCAGAGAAGGAACTAATGCGTCAACTGGTCGGTAG 1899 0.4355 MAKEVTATPSTSSFDYVLLGDDHANLSAVRGTSGHKSPWIEPERLKLRHRIGRGPFGDIWLATHHQSTEEYDEYHEVAAKMLYPIKEDNLRIVLEKFDELYHKFQRAAGACWLHGISILNGRICIIMNFYEGSVGDKMARLREGRISFHDVLRYGINLAQGILELHSKGILILNLKPFNVLLDNNDQAILGDFGIPNLLLGLSFQGPDMAHRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCTIVEMLTGDRPWYRRSVGEIYQFVVRKHEKPLIPSGLPPSIENILNGCFEYDLRNRPSMVDILSVFKSSLDALANDGGWQYLGTMKVAEKSSSTGYTDWFLLKDRLQVNDMVRSRKPTNSCKGQNMDVPEGTIVGLERSADQGFVLVRVHGIHDPLRIHSSTLERVTFGLAAGDWVRLKEEDEKHSPVGILHSISRDDRVAVGFIGMQTLWTGSSSELEMAEPYCVGQFVRLRVNVLSPQFEWPHKRGGAWPTGRISWILPNGCLIVKFPGMLTFGDEASTFLADPSEVEAVNFSTCPGIIEKYKHVEDHHWLVRPALIAFGLFTALKLGLSIGKKMGKNKVHAKESENQHIDAQNASINQHINPGNTVWVPAVSNILFREGTNASTGR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0633 632 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0633 632 SUPERFAMILY Protein kinase-like (PK-like) 42 308 IPR011009 -
Lele28g0633 632 CDD STKc_PknB_like 46 304 - -
Lele28g0633 632 PANTHER OS06G0639500 PROTEIN 1 628 - -
Lele28g0633 632 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Lele28g0633 632 Gene3D Transferase(Phosphotransferase) domain 1 41 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0633 Lele-ChrLele28 4034251 4037242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0633 36 311 MAP Kinase Kinase Kinase AT3G22750 25.743 2.18e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lele28g0633 PK_Tyr_Ser-Thr 4.6e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0657 01 3840760 3847299 Lele28g0633 28 4034251 4037242 CCT
Lele03g0657 03 3848887 3851103 Lele28g0633 28 4034251 4037242 CCT
Lele25g0635 25 4011376 4014353 Lele28g0633 28 4034251 4037242 hybridization
Lele26g0650 26 4125467 4128455 Lele28g0633 28 4034251 4037242 hybridization