Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0625 ATGAAAAAAACCTGGTCTTTCATCCATATCATCGGCGTTCTGTGCCTGTGTAATCTACTCTTGTCTGAAATCTGTCTGGCTGGCATTCAGAGCACCGGCACGATCTCACCAGGTTTTCAAGGCTCTCAGATGAATTGGATTGACAAAAACGGCATGTTTCTCGGGTCGAACAATGGAGAATTCACGTTTGGCTTCATCACTACCCCGAACGACAACACGTTATATCTTCTAGTAATCGTCCATGGTGACAATACCCAAGTGGTTTGGACGGCAAACAGAGGCCTCCCTGTTACTAATTCTGATAATTTTGTTTTCGACAAAACCGGTAATGTCTTTCTACGGAAAGGAAACGATGTGGTTTGGTCTACAGATACGAAGGGCAAAGGAGTTTCTTTAATGGAGTTACAGGACACAGGAAACTTGGTGTTGCTTGCTGATGATAATAGTACAATTTGGGAGAGTTTCAGTCATCCAACTGATACCTTATTGCCAATGCAGGAATTCAAAGAAGGTATGAAACTTATTAGTGAACCTGACCCAAATAACTTAACCCATGTTCTGGAGATCAAATCTGGTGATTTAGTTCTCTCTGCTGGTTTTCAAAACCCTCAGCCTTATTGGTCTATGCAGAATGAAGACCGCAAAATCATCGATAAAGATGGTAACGCGGTTGTTTCAGCCTCCATTAGTGCAAACTCGTGGAGGTTCTACGATAAAAATAAATCTTTGTTATGGCAGTTCATTTTTGCTAAAGATTCATCATCAGGCACAAATTCCACTTGGGTTGCTCTTCTGGGAAGTGACGGTTTCATCACTTTCTCTAATCTCAACAATGGAGGTTCAGTTAATCCCTCGCCAACAAAAATCCCAAAAGATTCTTGTAGCACACCTGAACCTTGTGGCCCTTATAGCATATGCACGGATGATAACAAGTGTCTTTGTCCTTCAGCTCTGAGATCTCGTCCCAATTGCAAACCAGGTGTCGTCTCTTCTTGTGATGACTCAAATGGATCCGTAGAACTTGTGGAAGGTGATGATGGACTTGGTTACTTCGCTCTTGGATTCCTTTCACCATCCTCCAAAACTGACTTGGAAGGCTGCAAATTTTCCTGCCTAGGAAATTGCTCATGTCTTGCCATGTTCTTCCACAGTAATTCAGGGAACTGTTTCATGTTGGATAATGTAGGAAGCTTTGAGAGTTCTGATAAAGATTCAGGTTTTGTTTCTTACATAAAGGTCTCGAGTAAGGGAGGATCTAGTTCTTCAGGGGGGGGAAGCAACAAGAAACACACTGTGGTGGTTGTGGTTATCATCATAACAACTTTGCTTGTCATTTTGGGTTTTCTCTGTGTGGGACTTGGATACTACAGAAGAAAGCAAAAATTGCCTGAGTCTCCAAGAGCGAGTTCAGAAGAGGACAATTTCTTGGAGAATTTGACTGGTATGCCTGTTCGTTTCAGCTATAAAGAACTGCAAACTGCTACTAAGAACTTCTCTGTGAAGCTTGGTCAGGGAGGTTTTGGCTCAGTTTATAAAGGAGTTCTAACAGATGGGACTCTATTAGCTGTGAAGAAGCTAGAAAGCATTGGCCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGCAGCATTCATCATCTTCATTTGGTCAGGCTTAAAGGATTCTGTGCTGAAGGAACCCATCGCCTTCTCGCTTATGAGTTCATGGCAAATGGCTCATTGGATAAATGGATATTCCAGAAAAACGAAGGGGAATTCATGTTGGATTGGGATACGAGGTTTAATATAGCTTTGGGCACAGCAAAAGGGCTTGCATACCTGCATGAGGATTGTGATTCAAAGATTGTTCATTGTGACATCAAACCAGAAAATGTTCTTCTCGACGAGAACTTCCTCGCCAAAGTCTCAGATTTCGGGTTGGCTAAACTCATGACTCGCGAACAAAGCCATGTTTTTACAACACTGAGGGGAACCAGGGGATATCTTGCACCAGAGTGGATCACGAACTATGCTATATCAGAGAAAAGCGATGTATATAGCTACGGGATGGTGTTGCTAGAGATCATTGGTGGAAGGAAGAACTATGATCCTAACGAGTCTTCAGAGAAATCCCACTTCCCATCCTTTGCTTTCAAGATGATGGAAGAAGATAAGTTGAAAGATCTTCTTGATTCAAAGTTGATAATAGATGAAAATGATGAAAGGTTTCATGTTGCCGTCAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCTCTGAGGCCTTCCATGACCAAAGTTGTTCAGATGCTTGAAGGTCTCTGTACTGTTCCTAAGCCACCATCTTCTTCTCCCATGGGTTCTCGCCTTTACTCATCTCTCTTCAAATCCATGAGTGAAGGTGGCACCTCTTCAGGACCGTCAGATTCTAATAGTGATGCATATCTTTCAGCAGTTAGGCTTTCAGGACCAAGATAA 2463 0.4247 MKKTWSFIHIIGVLCLCNLLLSEICLAGIQSTGTISPGFQGSQMNWIDKNGMFLGSNNGEFTFGFITTPNDNTLYLLVIVHGDNTQVVWTANRGLPVTNSDNFVFDKTGNVFLRKGNDVVWSTDTKGKGVSLMELQDTGNLVLLADDNSTIWESFSHPTDTLLPMQEFKEGMKLISEPDPNNLTHVLEIKSGDLVLSAGFQNPQPYWSMQNEDRKIIDKDGNAVVSASISANSWRFYDKNKSLLWQFIFAKDSSSGTNSTWVALLGSDGFITFSNLNNGGSVNPSPTKIPKDSCSTPEPCGPYSICTDDNKCLCPSALRSRPNCKPGVVSSCDDSNGSVELVEGDDGLGYFALGFLSPSSKTDLEGCKFSCLGNCSCLAMFFHSNSGNCFMLDNVGSFESSDKDSGFVSYIKVSSKGGSSSSGGGSNKKHTVVVVVIIITTLLVILGFLCVGLGYYRRKQKLPESPRASSEEDNFLENLTGMPVRFSYKELQTATKNFSVKLGQGGFGSVYKGVLTDGTLLAVKKLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCAEGTHRLLAYEFMANGSLDKWIFQKNEGEFMLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDENFLAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPNESSEKSHFPSFAFKMMEEDKLKDLLDSKLIIDENDERFHVAVKVALWCIQEDMSLRPSMTKVVQMLEGLCTVPKPPSSSPMGSRLYSSLFKSMSEGGTSSGPSDSNSDAYLSAVRLSGPR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0625 820 CDD B_lectin 47 158 IPR001480 -
Lele28g0625 820 Gene3D Transferase(Phosphotransferase) domain 1 571 774 - -
Lele28g0625 820 CDD STKc_IRAK 502 769 - -
Lele28g0625 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 44 777 - -
Lele28g0625 820 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0625 820 SMART serkin_6 496 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0625 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Lele28g0625 820 CDD PAN_AP_plant 328 413 - -
Lele28g0625 820 ProSiteProfiles PAN/Apple domain profile. 332 415 IPR003609 -
Lele28g0625 820 SMART blect_4 45 158 IPR001480 -
Lele28g0625 820 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Lele28g0625 820 FunFam Serine/threonine-protein kinase 41 156 - -
Lele28g0625 820 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Lele28g0625 820 PIRSF SRK 7 817 IPR024171 GO:0004674
Lele28g0625 820 FunFam S-receptor-like kinase 5 571 775 - -
Lele28g0625 820 MobiDBLite consensus disorder prediction 793 820 - -
Lele28g0625 820 Gene3D - 47 157 IPR036426 -
Lele28g0625 820 SUPERFAMILY Protein kinase-like (PK-like) 478 767 IPR011009 -
Lele28g0625 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 175 IPR036426 -
Lele28g0625 820 Pfam Protein kinase domain 500 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0625 820 Gene3D Phosphorylase Kinase; domain 1 462 570 - -
Lele28g0625 820 Pfam D-mannose binding lectin 87 169 IPR001480 -
Lele28g0625 820 MobiDBLite consensus disorder prediction 793 812 - -
Lele28g0625 820 FunFam serine/threonine-protein kinase PBS1-like 464 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0625 Lele-ChrLele28 3985396 3987858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0625 439 778 Receptor kinase-like Gene Family AT5G20050 45.706 7.00e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele28g0625 Pkinase 1.5e-50 CL0016