Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0624 ATGTATGCTCATTGCTGTGCTACTTTAAACCCTGATTTAAGGTTAGGTACAAAGGAATATCTGCTCATAAAAGAAGAGATCCGCAAGGTATTCTCGAAGGGAAAGGTAGCAGGTGTGCTTCGTCTGGTTTTCCATGACGCTGGGACTTTTGAAATGGATGATAATACAGGTGGAATGAATGGTTCTATAGTCTATGAACTTGATAGACTTGAAAATTCCGGACTAAAAAAAATCTTTAAAGGCATGTTTTATCTATCTATTGTTCTTAGTGGCCCCTATTGTGGCTTGAATAACACGATTGTATATTCTATAGAGTTAATTGCTTATGCATACATACAGAATAGTCTTCGATTTTATATGCTGGCTTATGCCATGGTGGATATATTGTGTGCTAAAATGTATGCAGTAATTATTGACTTGATCCAGGCCGACAAATTTTACTTTTGGTTTTCTCTATCAGTACCCTGTGCAGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTTCTCTATGTGGAGGACCAGATATCAAAGTTTCAGTTGGCAGGCTAGATACATTGGAGCCTGATCCGGAAGGGAAACTTCCTGAAGAGTCTCTTGATGCTTCTGGCGGTATGTCAAGTATGATTGGCCTTCGTTCAGATCACGCACTTGTCGAGGATGATGAATGTTTAAGGTGGATTAAAAAGTACGCGGACAATGAGAATATGTTCTTTGAAGATTTCAAGAATGCACATGTCAAGCTGGTGAATACAGGTGAGCGTCAGCTTTTCCATCCCCCAACGAAAGCACTTTCTTCTTCGTGGCGTTGA 810 0.4037 MYAHCCATLNPDLRLGTKEYLLIKEEIRKVFSKGKVAGVLRLVFHDAGTFEMDDNTGGMNGSIVYELDRLENSGLKKIFKGMFYLSIVLSGPYCGLNNTIVYSIELIAYAYIQNSLRFYMLAYAMVDILCAKMYAVIIDLIQADKFYFWFSLSVPCADMIAVAGAEAVSLCGGPDIKVSVGRLDTLEPDPEGKLPEESLDASGGMSSMIGLRSDHALVEDDECLRWIKKYADNENMFFEDFKNAHVKLVNTGERQLFHPPTKALSSSWR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0624 269 SUPERFAMILY Heme-dependent peroxidases 21 80 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele28g0624 269 Pfam Peroxidase 24 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g0624 269 ProSitePatterns Peroxidases active site signature. 36 47 IPR019794 GO:0004601
Lele28g0624 269 SUPERFAMILY Heme-dependent peroxidases 150 252 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele28g0624 269 Gene3D - 13 202 - -
Lele28g0624 269 PRINTS Plant ascorbate peroxidase signature 229 253 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele28g0624 269 PRINTS Plant ascorbate peroxidase signature 152 173 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele28g0624 269 PRINTS Plant ascorbate peroxidase signature 36 51 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele28g0624 269 PRINTS Plant ascorbate peroxidase signature 54 64 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele28g0624 269 Gene3D Peroxidase, domain 2 205 245 - -
Lele28g0624 269 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 20 201 IPR044831 GO:0004601|GO:0034599
Lele28g0624 269 ProSiteProfiles Plant heme peroxidase family profile. 154 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0624 Lele-ChrLele28 3979242 3982973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0624 154 229 Peroxidase AT5G14130 38.202 4.73e-07 48.5