Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0613 ATGTGGGTGCTTGTTTTATGTGTGTCAGCCTTGCTTGTGGAAGTTTGTTCAGGCTCTATGATAGATCTTACCACTTTCTCTTTCGCATCGTTTGGCCCTGAAAGTTGCAGCAGCGGTGAGTTGCTGTGTATGGGGTCGGCGACATCAGGGGAGGGGCATTTGAGGCTGACACCAGAGCCACGGTTGAATTCGAGTTCGCCGCCGTCGTCAGTGGTGAACAAGATAGGAAGGGTATTATACCCTCAAAGGGTTACAGCGTGGCCGGCCTTAATCAGCACTTCATTCACTATGAGGATCGCTCCCGTGGATAATTCATCAACCATTTCTGGTGATGGTCTTACTTTCGTTTTTGCAAGCGATAATAACCCTTCACCACCTTCTAGCTACGGCTCATATCTCGGCTTATTTGATGATTCTACTCCAGGTGAATTTCTGCAACAAATGGCTGTTGAGTTCGACACGTTCAAGAACGAGTTTGATCGAGATGGGAACCACGTTGGGGTAGTCACAGGAAGCATCATAAGACCAGTTGCTTCAGAGAGTCTACATTCCCTCGGAATTAGACTCAATAGTGGACAATCTATTCAGGTCAAAATAGAATTCGATGGTTCCATTAACATGCTATATGTCTCTCTCGGATACTCCGAAAGTCAGTTAAAGAGCGTTCTTAACGTCACAATCGATCTGCCAAAGATTGTCCCAAGCACAGTTTATGTTGGTTTCACAGCTTCTACAGGCAACACTTTGCCTGAAAGCCATGAAATCCTGAATTGGATTTTCACATCAGTGCCTTTGCCCTCATATTCTAATAATAAACCCAGCAAAAACAAGACCGTTAAGACCATTCTCATCATTGTCATACCCATTTCTCTGGTCATCTTGGCGATCTTCATTCCATTTATCTGGGAAAACTTGAAGAACAGGAACAAGATTGAGAGGGGTAATCATAGGCAAGATGAAATCGAATGCTCATCAATTACTGCTCTAGATATCCCCAAAGAGTTCACTTTCGAACAATTGTATATTGCTACTAGCAGCTTCAGCAAGGAGAATCTTTTAGGAAGAGGTGGATTTGGTAGTGTTTATAAAGGCCTCCTACTTAATCCTCCAAAACCCATAGCAGTCAAGAAGATTTCAGCAAATTCCAAACAAGGTGAAAGAGAGTATTTTGCTGAAATATGTACCATAGGCCGATTGAGGCACAAGAACATAGTACAACTACTAGGGTGGTGCCATAAAGGTGAATATCTTCTGTTGGTGTATGAGTACATGCAAAATGGAAGTTTAGATCGGTTCATAGGGAAGGACATTCTGAACTGGCAAACAAGGCACAAGATATTAATAGGTCTTGCGTCAGCATTGTTGTACCTTCACGAAGAGTGTGGAAACCCAGTTGTTCACAGAGACGTTAAACCAAACAACATAATGCTAGACTCTGAATTCAACGCTCATCTAGGAGATTTTGGCCTCGCAAGATTGCTGCAGAATGAAGAATCAGTGATCACAAACCTTGCAGGAACTCCAGGATATTTGGCTCCAGAAGTAGGTTTCACAGGAAAAGCAACACCAGAATCAGATGTTTACAGTTTTGGGGTGGTGGTGCTTGAAGTTATATGTGGAAAAAGATCAAAGAACACAGCAGGAGATCAGTTCAGTTTGGTGGACTATGTTTGGAATATGCATAGTGAGAATGCATTAATTGAGTGTGTGGATGCACTGTTAGAAAAGGAGTTCGATGAGGAAGAAGTGAGAAGGGCATTGATGGTTGGGTTGGCTTGTTTGTCTTCAGATTCAATGTTGAGACCAAAAATGAGAAAAGTGGTCCACATTTTGCTGGATCGAAACGAGCCCTTGATGGAATTACCTGGAGTGAGACCTCTTGGGGTTTATGTGTCAGTTTCTTCATCTTTTTCTACCTCTAACTTCGGTTCTAGAGGTGGTTATTCATATCCGCTGCCTCAGTCAGGAACAACATCTTCAGATGAAATTACCATTCTGTACGATCAACAGTGA 2013 0.4282 MWVLVLCVSALLVEVCSGSMIDLTTFSFASFGPESCSSGELLCMGSATSGEGHLRLTPEPRLNSSSPPSSVVNKIGRVLYPQRVTAWPALISTSFTMRIAPVDNSSTISGDGLTFVFASDNNPSPPSSYGSYLGLFDDSTPGEFLQQMAVEFDTFKNEFDRDGNHVGVVTGSIIRPVASESLHSLGIRLNSGQSIQVKIEFDGSINMLYVSLGYSESQLKSVLNVTIDLPKIVPSTVYVGFTASTGNTLPESHEILNWIFTSVPLPSYSNNKPSKNKTVKTILIIVIPISLVILAIFIPFIWENLKNRNKIERGNHRQDEIECSSITALDIPKEFTFEQLYIATSSFSKENLLGRGGFGSVYKGLLLNPPKPIAVKKISANSKQGEREYFAEICTIGRLRHKNIVQLLGWCHKGEYLLLVYEYMQNGSLDRFIGKDILNWQTRHKILIGLASALLYLHEECGNPVVHRDVKPNNIMLDSEFNAHLGDFGLARLLQNEESVITNLAGTPGYLAPEVGFTGKATPESDVYSFGVVVLEVICGKRSKNTAGDQFSLVDYVWNMHSENALIECVDALLEKEFDEEEVRRALMVGLACLSSDSMLRPKMRKVVHILLDRNEPLMELPGVRPLGVYVSVSSSFSTSNFGSRGGYSYPLPQSGTTSSDEITILYDQQ 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0613 670 Pfam Legume lectin domain 25 269 IPR001220 GO:0030246
Lele28g0613 670 FunFam Lectin-domain containing receptor kinase A4.3 424 632 - -
Lele28g0613 670 CDD lectin_legume_LecRK_Arcelin_ConA 24 262 IPR001220 GO:0030246
Lele28g0613 670 PANTHER - 58 613 - -
Lele28g0613 670 SUPERFAMILY Protein kinase-like (PK-like) 332 633 IPR011009 -
Lele28g0613 670 Gene3D Transferase(Phosphotransferase) domain 1 424 619 - -
Lele28g0613 670 Pfam Protein kinase domain 348 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0613 670 FunFam serine/threonine-protein kinase PBS1-like 313 423 - -
Lele28g0613 670 Gene3D - 21 284 - -
Lele28g0613 670 CDD STKc_IRAK 353 611 - -
Lele28g0613 670 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Lele28g0613 670 ProSitePatterns Protein kinases ATP-binding region signature. 353 377 IPR017441 GO:0005524
Lele28g0613 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Lele28g0613 670 SMART serkin_6 347 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0613 670 ProSiteProfiles Protein kinase domain profile. 347 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0613 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 263 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0613 Lele-ChrLele28 3933480 3935871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0613 2 626 Receptor kinase-like Gene Family AT5G55830 38.288 2.81e-119 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele28g0613 Pkinase 1.3e-47 CL0016