Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0604 ATGGCAAAGAAGAAGAATCCCCTGGTTTTTATGGATGTCTCTATAGATGGGGACCCTGTTGAAAGGATGGTTTTTGAGCTGTTCTATGACATTGCTCCCAAGACTGCAGAAAATTTCCGTGCACTATGTACAGGAGAAAAGGGAGTCAGTCCAAGTATTGGGAAGCCACTGCACTATAAGGGTTCCTTCTTTCATCGCATTTTAAAAGGCTCCATTGTGGAGGGAGGTGATTTTGTCAATCGAAACGGGACTGGTGGAGAAAGCATATATGGTTCGAATTTCCCAGATGAGTCACCTAGGCTTAAGCATGATGTACCAGGTCTCCTGTCTATGGCAATTGCTAATCGCAATACTCTTGGTTCTCACTTTATGATTACATTGAAAGCTGATCATTATCTCGACAGGAAGCATGTGGTATTTGGGAAGCTTGTTCAGGGACTTAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGATGGGCGTCCAACTGTAACTGTTAAAATCATCAATTGTGGTGAATCTAGTGAAGATGGAAAGAAGATGAATAAATTGACTTCTGAAACCAATAATCATGAAGCACGAAGGAAGGGAAAGCACAAAAAATCTTCAAGAGACAGAAGGAAAAGGAGAAAAAGATACTACTCATCTGAATCAGAGAGTTATTCAGATTCAGACATGGAATCATCAGAATCTGATAGTGATTCTGACTCAGATCTGTCATCATCATCGTACATAAGTTCTTCCAGTGATGACAGGCGGAAAAAGAGAAAAAGATATTCTAGGAAAGACAAACATAGACGCCGGAAAAGAAGGGATAGGCGTCGGGACAAGAGGCGACGGAGAAGAAATAAAAGATCAAAGCGTAGATCTAGAAGGGATTCGGACACTACTACTGATTCAGATAGTGAAAGCAAAAGTGGCGGCAGCTCTGATGGTGAAAGTTTTGATGCTCAAGGGAAGGAGAAAAATCGCAGAGATTATTCTCTGAAAAATGCTGAAGTTCAGTCTCCCCTAGCTGGGGCTGGAGAAGTACATTCCATGCATCATAAAAGGAGGGGAGAAGTGAACACACCAGAGAATGAGGAAGCATCCCCCAAAGAAAATGGAGAACGTCATAGCAATGGTATTGGAGCTGACTCTAGATCTGATAGAAGTGAGGGGAGGCAGCCTGATGTGATGGATGATAATCCTGACAAATCTAGGAGTCGAAGCATGAGTCCCAAGAGGACCATGAGTAAGAGTATGAGTATTAGTCCCAGGAGAAGTGAGAGAAAGAGCCCAAGTGCTAGTCCAGAAAGGAAGATTAGCAGAAGTCCTAGTGGTAGTAGAAGCCCTGGAGCTCCATCCAGGAGGAGTTTAAGCAGAAGTCCTGCCAGGAGCATCAGTAGAAGCCCAGTGAGGGTTACGAAGGGAAGAGGGGGCAGTAGGAGCCCTGTGAAAACCCGTTCACTAAGAAGTGTCAGTGAGAGTCCTGTGAGATCCCCATCTCGTAGCCACCGGAGCAGGAGTTCTCCTAAACTATCATCGAGAAGGTCTGCTAGTAGAAGCCCTGTAAGGGTTAGGAGGAGTAGAAGCAGGAGTCCAGTTAGATCTTCTGCAAGGAGCTTGAGCAGAAGCTCTGGCAGGGTTCCATCAAGGAGAGGTGTCAGCCGAAGTCCTGTGAGGGCACCTAGCAGAGGAAATCGACGCAGCTATTCTAGGAGTCCTAGTCCTGTTCGTAGGCCAAAGTCATCTCGTGGATTGTCAAGGAGTGTCTCTCCTGATGTATCCCCAAAGCGTATCAGAAGGGGAAGAGGTTTTAGTGAGAGATACTCGTATGCAAGAAGGTATCGAACCCCTTCTCGATCTCCTGTGAGGTCTTACCGGTACAATGGAAGAAGTGACCGAGACAGATATTCTAGTCACAGAAGGTTATCCCCTAGGCGCTACAGAAGCCCCCCACCTCGAGGAAGAACACTGCCCAGGCACCGAAGCAGAAGAAGTAGAACACCCTCAGTATCTCGCAGCCCTCGCTATCATGGTCGCCGCTACAGCCGAAGCCCTGTTCACAGTCATTCCCCTGTTGAGCCATATAGATCTCGTGCTTCGCCTCGTGTTGAGAAGCGCAGGTCATCTTCTCGAAGTCGAAGCCGCAGCCTGTCACAATCTAGGTCTTCAGTTGAACCACAGTCTCCTCGAGCTGCCAGTAAAGACAGATCAAGGTCATCCTCCCAAAGCCCAGATGGAAAGAAAGGCTTGGTCTCATATGGCGATGGTTCTCCATATTCAGACCAAAGGTGA 2283 0.4647 MAKKKNPLVFMDVSIDGDPVERMVFELFYDIAPKTAENFRALCTGEKGVSPSIGKPLHYKGSFFHRILKGSIVEGGDFVNRNGTGGESIYGSNFPDESPRLKHDVPGLLSMAIANRNTLGSHFMITLKADHYLDRKHVVFGKLVQGLNILKKIEDVGDEDGRPTVTVKIINCGESSEDGKKMNKLTSETNNHEARRKGKHKKSSRDRRKRRKRYYSSESESYSDSDMESSESDSDSDSDLSSSSYISSSSDDRRKKRKRYSRKDKHRRRKRRDRRRDKRRRRRNKRSKRRSRRDSDTTTDSDSESKSGGSSDGESFDAQGKEKNRRDYSLKNAEVQSPLAGAGEVHSMHHKRRGEVNTPENEEASPKENGERHSNGIGADSRSDRSEGRQPDVMDDNPDKSRSRSMSPKRTMSKSMSISPRRSERKSPSASPERKISRSPSGSRSPGAPSRRSLSRSPARSISRSPVRVTKGRGGSRSPVKTRSLRSVSESPVRSPSRSHRSRSSPKLSSRRSASRSPVRVRRSRSRSPVRSSARSLSRSSGRVPSRRGVSRSPVRAPSRGNRRSYSRSPSPVRRPKSSRGLSRSVSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSSHRRLSPRRYRSPPPRGRTLPRHRSRRSRTPSVSRSPRYHGRRYSRSPVHSHSPVEPYRSRASPRVEKRRSSSRSRSRSLSQSRSSVEPQSPRAASKDRSRSSSQSPDGKKGLVSYGDGSPYSDQR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0604 760 MobiDBLite consensus disorder prediction 558 586 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 637 667 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 255 290 - -
Lele28g0604 760 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lele28g0604 760 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lele28g0604 760 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lele28g0604 760 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lele28g0604 760 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Lele28g0604 760 Gene3D - 1 182 IPR029000 -
Lele28g0604 760 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Lele28g0604 760 MobiDBLite consensus disorder prediction 710 744 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 408 425 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 530 547 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 175 194 - -
Lele28g0604 760 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 316 330 - -
Lele28g0604 760 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Lele28g0604 760 MobiDBLite consensus disorder prediction 345 406 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 175 760 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 480 499 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 590 610 - -
Lele28g0604 760 MobiDBLite consensus disorder prediction 433 464 - -
Lele28g0604 760 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Lele28g0604 760 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lele28g0604 760 MobiDBLite consensus disorder prediction 195 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0604 Lele-ChrLele28 3877097 3887212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0604 25 170 U-box Gene Family AT5G67530 41.216 1.41e-21 97.8