Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0600 ATGGGCTGGCCGCTAGCTGTAAAAGCAACAAACGGATTTGTGTTGGGTGGTTCTCTCGCTTCTTCTTCCCTCGCAGCACACAACAGTCAAACTGGTCAAAACAAGGCGTCGCCTCCTCCTAATTCCCATGTTCATGCTGAGATGCGCCCCTTCAACTTAATCCTCATAAAGATTGCCGCTATGGCGGTCAAGAATGGACCATTCCACGGCATTGTCCACGATGTCAAAGGAAGAGCTGCATGCTATAAACAAGATTGGACTGGCGCATTCTGTTCTGGCGTAAAGATATTGGCTCCAACTTTCTACATGTTCTTCGCTTCTGCTCTCCCTGTCATTGCCTTTGGAGAACAACTTAACAAGGATACTGACGGAAGCTTGAGCACAGTAGAAACATTAGCATCAACTGCTATTTGCGGAATCATCCACTCCATATTGGGTGGACAGCCTTTGTTGATTTTGGGGGTTGCTGAACCCACTATTATAATGTATGGTTATCTGTACCAGTTTTGCAAAAAGAGGCCAGAGTTGGGTGCTCATTTGTTTCTGGCTTGGGCTGGTTGGGTCTGTGTCTGGACTGGACTCATGTTGATTCTGCTTGCAATTTTCAATGCCTGCACGGTTATCATTAGGTTTACTAGAGTTGCAGGGGAATTATTTGGCATGTTAATCACTGTCCTATTCTTTCAACAAGCTATAAGGGGACTAATAGGCGAGTTTGGTGTTCCCAAGGATGTAGATCCATCAGCGCAGGAATTTCAATTCCAATGGCTGTATACTAATGGATTGCTTGCCACCATTTTTGCTTTTGGGATACTTTTCACTGCCTTGAAAAGTAGAAGAGCAAGATCATGGCGATATGGAACAGGATCTCTACGGGGTCTCATCGCAGATTACGGAGTTCCATTGATGGTTGTGTTATGGACTCTGTTATCTTATCTTGTACCAAACAAATTGCCAGTTGGAGTTCCTAGAAGGCTGTATTGTCCCCTTCCTTGGGAATCTGTGTCTCTGTACCACTGGACAGTAGTGAAGGATATGGGGAAGGTACCTGTGGTTTATATTTTTGCTGCAATTGTTCCAGCTGTGATGATAGCAGGATTATACTTCTTTGATCATAGTGTAGCCTCCCAGCTGGCTCAACAGAAGGAGTTCAACCTTCAAAAGCCATCAGCCTACCACTATGATATGTTTTTGCTCGGAATTCTGACTCTTATTTGTGGTCTTCTTGGGCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCCCCAATGCATACAAAAAGTCTGGCGGTTCTTAAGAGGCAGTTGATGCGAAAGAAGGTGGTACAGAGCGCCAAAGAATGCATTAAGTACCATAGGAGCAACTCTGAGTTATATGGAAAGATGCAGGCAGTGTTCATAGAAATGGACACAGCCCCTACAGATAAGGAGTTAGAGACTTTGAAGGAGGCTGTAACGAAACGTGAGGACAAGGATGGTGACCAAGGTGAATTTGATCCTGAGGTACACATAGATGCCTATTTGCCAGTTAGAGTAAACGAGCAAAGAATGAGCAATACTTTGCAGTCAATCCTTGTGGGGGCATCACTTTTCGGCATCCCCATCATCAAAAGGATTCCAACCTCTGTTCTTTGGGGATATTTTGCTTACATGGCCATTGATAGCCTTCCAGGGAATCAATTCTGGGAAAGGATTCTGCTTCTCTTTATCACTCCAAGCAGGAGATACAAAATCTTGGCCGGTTCTCATGCTTCATTCGTGGAGTCGGTTCCTTTCAAGAGCATAGCTTTGTTCACAGTGCTGCAGCTTCTTTATTTGGTGGTGTGCTGGGGAGTGACATGGATCCCTATAGGTGGAATATTGTTTCCACTACCTTTCTTCCTTCTCATATGCATAAGAGAGCATTTGCTTCCCAAGTTATTCGATCCCAGCCATCTTCAGGAGCTAGATGCTTCTGAGTACGAGGAAATTGCTGGTGATCCACTTGTTTCCCGTAATATATCACTTGTGGACAAGGTTGCGGCTGATGGTGATGATGATAAAGGTTCCGAAGATTTCTATGATGCTGAGATTTTGGATGAGATGACAACCAACAGGGGAGAGAAACCAAAGCTTCAACGATAG 2121 0.447 MGWPLAVKATNGFVLGGSLASSSLAAHNSQTGQNKASPPPNSHVHAEMRPFNLILIKIAAMAVKNGPFHGIVHDVKGRAACYKQDWTGAFCSGVKILAPTFYMFFASALPVIAFGEQLNKDTDGSLSTVETLASTAICGIIHSILGGQPLLILGVAEPTIIMYGYLYQFCKKRPELGAHLFLAWAGWVCVWTGLMLILLAIFNACTVIIRFTRVAGELFGMLITVLFFQQAIRGLIGEFGVPKDVDPSAQEFQFQWLYTNGLLATIFAFGILFTALKSRRARSWRYGTGSLRGLIADYGVPLMVVLWTLLSYLVPNKLPVGVPRRLYCPLPWESVSLYHWTVVKDMGKVPVVYIFAAIVPAVMIAGLYFFDHSVASQLAQQKEFNLQKPSAYHYDMFLLGILTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLMRKKVVQSAKECIKYHRSNSELYGKMQAVFIEMDTAPTDKELETLKEAVTKREDKDGDQGEFDPEVHIDAYLPVRVNEQRMSNTLQSILVGASLFGIPIIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKILAGSHASFVESVPFKSIALFTVLQLLYLVVCWGVTWIPIGGILFPLPFFLLICIREHLLPKLFDPSHLQELDASEYEEIAGDPLVSRNISLVDKVAADGDDDKGSEDFYDAEILDEMTTNRGEKPKLQR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0600 706 MobiDBLite consensus disorder prediction 674 706 - -
Lele28g0600 706 Gene3D Helical hairpin bin 78 120 - -
Lele28g0600 706 Pfam HCO3- transporter family 509 600 IPR011531 GO:0006820|GO:0016020
Lele28g0600 706 Pfam HCO3- transporter family 260 434 IPR011531 GO:0006820|GO:0016020
Lele28g0600 706 Pfam HCO3- transporter family 67 238 IPR011531 GO:0006820|GO:0016020
Lele28g0600 706 PANTHER ANION EXCHANGE PROTEIN 50 657 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lele28g0600 706 MobiDBLite consensus disorder prediction 691 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0600 Lele-ChrLele28 3849349 3853808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0600 67 700 Antiporters AT4G32510 67.287 0.0 911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0600 25 3826183 3826820 Lele28g0600 28 3849349 3853808 hybridization
Lele26g0615 26 3927601 3932782 Lele28g0600 28 3849349 3853808 hybridization