Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0597 ATGGAAATTTTCTCAAGCTCTGCTCGTGAAGATGATGAAGAAGCTCTTAAATGGGCCTCAATTGAGAGACTTCCTACGTATCTGCGCATAAGGAGAAGCATACTCACTAATGATGAAGGTAATGCTAAAGAAATCGATATCAAGCAACTGGGATTAACAGAGAGGAAGATTCTGTTGGATAGACTCTTGAAATTAGCAGAACAAGATAATGAACAGTTTTTGTTGAAACTTAAGAAACGCATGGACCGAGTTGGACTTGAGATTCCAACAATTGAAGTTCGATTTGAGCATATAAATGTGGAGGCAGAGGTCTACGTTGGAAGTAGAGCATTGCCTACAATGTTCAACTTCTATGTGAATGTTCTAGAGTATTCTGGGAGAGTCACATATAACGGTCATGGGCTGGACGCGTTTGTGCCACAGAGGACATCAGCTTATATTAGTCAAGATGATATCCACATTGGAGAAATGACTGTTAGAGAAACACTTTCTTTCTCTGCCAGATGTCAAGGGGTTGGACAGAACTATGAGATGCTGGCAGAGCTACTTAGAAGAGAGAAGGAAGCAAAGATCAAACCAAACCCTGATATTGATGCCTACATGAAGGCGGCTGCATTAGAAGGGCAGGAAGCAAGTGTGGTCACTGACTACATTCTGAAGATTTTGGGACTTGAAGTATGTGCGGATATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGTGGACAGAAAAAGCGAGTTACAACAGATGGGCAAATTGTGTACCAGGGTCCCAGAGAGAAAGTACTCGACTTCTTTGAATCTATAGGTTTCAAGTGCCCCGAAAGAAAAGGAGCTGCTGATTTCTTACAAGAAGTGACATCAAGGAAAGATCAATGGCAGTACTGGGCACGTAAAGATGAACCTTACAGTTTCGTTACTGTCAAGGATTTTGTTGAAGCCTTCCAGTCATTTCACGTTGGTCATGAACTTGGTGAAGAACTAGCCAAGCCTTTTGACAAGACCAAATGCCACCCAGCTTCCTTGAGCACAAAAAAATATGGCGTTAGCAAGAAGGAGCTGTTAAGAGCTTGTATTAGCAGAGAATTTTTGTTCATGAAGAGAAATTCATTTGTATACATATTCAAACTGACTTTACTTAGCTATTTAGCAATCACGACAGCAACGTTATTTCTACGAACTAAGATGCATAAAGATACTGTTGCGGATGGAGGAACTTATATGGGTGCTCTGTTCTTTGCAATCATTGTAGCTATGTTCAATGGAATATCAGAGCTAAACATGACGATCATGAAACTTCCCGTCTTCTACAAGCAAAGAGACCTTCATTTCTATCCTTCATGGGCCTACTCCCTGCCACCATGGATCCTCAAAATACCATTCAGCCTGGTAGAAGTTGCCATTTGGGAAGCAATAAGTTATTATGTCATCGGCTTCGATCCAAATATTACAAGGTTTTTCAAACAGTACCTGCTACTCCTGTGCCTTAACCAGATGGCATCTGCACTATTTCGATTGATGGCGGCATTAGGACGGGATATAGTAGTTGCAAACACTGTTGGGTCGTTTGCTTTGCTTGTCGTCATGGTTTTGGGAGGATTTGTGATTTCACGAGAGGATGTCCACAAATGGTTCCTGTGGGGCTACTGGTCCTCACCACTTATGTACGCACAGAATGCTATTGCCGTCAATGAATTCCTCGGGCATAGTTGGAGAAAGGTTATTGCTGGTAGGAAGGAAACCTTGGGAGTTATGGTACTGAAAGCTCGTGGGTTTTTCCCAGAAGCTTATTGGTATTGGATTGGAGTAGGAGCTTTGATTGGTTATGCCTTCCTATTTAATTTGCTCTACACATTGGCTCTGCAATATCTCAGTCCATTCAGAAAGGCTCAGGCAGGGCTATCTCAAGACAAATTGATGGAGAGAAATTCTGGGTATGCAGAGCTCACTGAACAATCCCCAAAAGGAAAGAGCTCTTCTGAACCAAATATTGAAGAAGAAGCAAACCTATCGAGAAGGTCATTTTCTTGTAGCATTAATGATAAAAAGGCTGGTAGAAGCGGAAACCGGGGTATGGTTCTTCCCTTTCAACCTCTATCCCTCACTTTTGATGAGATCAGATATTCTGTAGACATGCCTCAGGAAATGAAGAATCAAGGAGTTTTTGAGACTCGTCTTGAACTCTTGAAAGGTGTTAGTGGAGCTTTTAGGCCCGGCGTACTAACAGCTTTGATGGGTGTAAGTGGTGCTGGGAAGACTACTCTAATGGATGTTCTAGCTGGAAGAAAAACTGGTGGATATATTGAAGGAAGCATCACAATATCTGGGTACCCAAAGAGACAAGAAACATTTGCCAGAATATCAGGATATTGTGAACAATTTGATATTCACTCACCTTATGTTACGGTCTATGAATCTTTACTGTATTCTGCATGGCTTCGATTAGCCCCTGATGTTGATTCTTCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTTGTGGAGCTTACTTCATTAAGAGAAGCACTTGTTGGATTGCCCGGCGAGGCTGGACTTTCGACGGAACAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAACCCTTCAATAATATTCATGGATGAGCCAACCTCTGGTCTTGATGCCAGAGCAGCTGCAATTGTGATGAGAACTGTGAGAAACACTGTGGACACAGGACGTACAGTAGTTTGCACCATCCACCAACCAAGTATCGATATATTCGATGCCTTTGATGAGCTACTACTTTTAAAAGTGGGAGGAGAACCAATATATGCTGGTCCATTAGGCCGCCATTGTTCCCATCTAATCCAATACTTTGAGGGCATTCAAGGAGTACCCAAGATCAAAGATGGTTATAATCCTGCAACATGGATGTTGGAGGTTACATCGGCAGGAACAGAGGCAAATCTCAGTGTCAACTTCACTAATGTGTACAGAAACTCAGAACTATACCGGAGAAACAAACAATTGATCCGTGAGCTTAGTAGGCCCCCTCAAGATTCAAAAGATCTATACTTTGCTAATAAGTATGCACAACCTTTTTACCCACAACTTATGGCTTGCCTGTGGAAACAGCATTTATCATATTGGCGAAACACATCATATACGGCAGTGAGACTCATGTTTACAACAATCATTGCTGTATTGTTTGGGATAATTTTTTGGGGCGTTGGCTTGCAAAGGAGAAAAGATCAAGACCTTTTCAATGCAATGGGGTCAATGTATGCTGCAGTTACCTTCATTGGAGTACAAAATGCTGCTTCCGTGCAACCCCTAGTAGCTGTTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCTGGCATGTACTCCGCTTTGCCATATGCTCTTGCACAGGTTATCATCGAGCTTCCCCACATCTTGATTCAGACTGTGATATATGGGATTATAGTATATGCCATGATGGGATTTGAGTGGACAAAACCCAAGTTCTTATGGAATCTCTTCTTCATATACTTCACCTTCTTATACTTTACTTTCTATGGCATGATGACTATGGCCATCACTCCCAACCCCCACGTTGCGGGCGTACTGGCAAGCGCCTTCTATGCAATATGGAACCTTTTCTCAGGCTTCGTCATTCCCTTATCAAGAATACCCATTTGGTGGAAGTGGTACTATTGGATTTGCCCGGTTGCGTGGACCTTGAATGGATTGATTACCTCCCAATACGGAGATGAAAAGGATAAATTAGAGAGTGGCCAAACAGTAGAAGAATTTGTGAGGAGTTACTTCGGGTTTAAACATGAATTCTTGGGAGTTGTTGCAGTTTTGGTGGCTGGTTTCTCGGTCTTCTTCGCATTCATGTTCGTCTTCGGCATCAAAGCATTGCACTTCCAGAGAAGATGA 3900 0.4238 MEIFSSSAREDDEEALKWASIERLPTYLRIRRSILTNDEGNAKEIDIKQLGLTERKILLDRLLKLAEQDNEQFLLKLKKRMDRVGLEIPTIEVRFEHINVEAEVYVGSRALPTMFNFYVNVLEYSGRVTYNGHGLDAFVPQRTSAYISQDDIHIGEMTVRETLSFSARCQGVGQNYEMLAELLRREKEAKIKPNPDIDAYMKAAALEGQEASVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTDGQIVYQGPREKVLDFFESIGFKCPERKGAADFLQEVTSRKDQWQYWARKDEPYSFVTVKDFVEAFQSFHVGHELGEELAKPFDKTKCHPASLSTKKYGVSKKELLRACISREFLFMKRNSFVYIFKLTLLSYLAITTATLFLRTKMHKDTVADGGTYMGALFFAIIVAMFNGISELNMTIMKLPVFYKQRDLHFYPSWAYSLPPWILKIPFSLVEVAIWEAISYYVIGFDPNITRFFKQYLLLLCLNQMASALFRLMAALGRDIVVANTVGSFALLVVMVLGGFVISREDVHKWFLWGYWSSPLMYAQNAIAVNEFLGHSWRKVIAGRKETLGVMVLKARGFFPEAYWYWIGVGALIGYAFLFNLLYTLALQYLSPFRKAQAGLSQDKLMERNSGYAELTEQSPKGKSSSEPNIEEEANLSRRSFSCSINDKKAGRSGNRGMVLPFQPLSLTFDEIRYSVDMPQEMKNQGVFETRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKRQETFARISGYCEQFDIHSPYVTVYESLLYSAWLRLAPDVDSSTRKMFIEEVMELVELTSLREALVGLPGEAGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKVGGEPIYAGPLGRHCSHLIQYFEGIQGVPKIKDGYNPATWMLEVTSAGTEANLSVNFTNVYRNSELYRRNKQLIRELSRPPQDSKDLYFANKYAQPFYPQLMACLWKQHLSYWRNTSYTAVRLMFTTIIAVLFGIIFWGVGLQRRKDQDLFNAMGSMYAAVTFIGVQNAASVQPLVAVERTVFYRERAAGMYSALPYALAQVIIELPHILIQTVIYGIIVYAMMGFEWTKPKFLWNLFFIYFTFLYFTFYGMMTMAITPNPHVAGVLASAFYAIWNLFSGFVIPLSRIPIWWKWYYWICPVAWTLNGLITSQYGDEKDKLESGQTVEEFVRSYFGFKHEFLGVVAVLVAGFSVFFAFMFVFGIKALHFQRR 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0597 1299 FunFam ABC transporter G family member 40 716 946 - -
Lele28g0597 1299 Pfam ABC-transporter N-terminal 60 117 IPR029481 -
Lele28g0597 1299 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 702 954 IPR003439 GO:0005524
Lele28g0597 1299 Pfam ABC-2 type transporter 1028 1240 IPR013525 GO:0016020|GO:0140359
Lele28g0597 1299 Pfam ABC-2 type transporter 355 567 IPR013525 GO:0016020|GO:0140359
Lele28g0597 1299 MobiDBLite consensus disorder prediction 647 670 - -
Lele28g0597 1299 CDD ABCG_PDR_domain2 699 937 IPR034003 -
Lele28g0597 1299 Gene3D - 112 265 IPR027417 -
Lele28g0597 1299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 723 939 IPR027417 -
Lele28g0597 1299 Pfam ABC transporter 730 882 IPR003439 GO:0005524
Lele28g0597 1299 SMART AAA_5 739 931 IPR003593 -
Lele28g0597 1299 Gene3D - 716 946 IPR027417 -
Lele28g0597 1299 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 122 250 - -
Lele28g0597 1299 Pfam Plant PDR ABC transporter associated 572 633 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0597 Lele-ChrLele28 3830200 3836822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0597 727 914 Calmodulin-binding Proteins AT2G36910 26.108 3.81e-06 49.7