Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0596 ATGGGATCTTACAAAGATCAAGAACAAGAAGAACAAGCTAAATGTGCCTGGGTTCATGGACCTATCATCATAGGTGCTGGTCCCTCTGGTTTAGCAGTCGCCGCTTGCCTCTCCCAACATGGCGTCCCCTGTGTTATTCTTGAGAAGAGTGACTGTTTAGCTTCTCTATGGAAACACAGAACGTACGACCGTCTCAAACTTCACCTTCCCAAACACTTCTGTGAACTTCCCTTGATGGGTTTCCCTCCCAATTTCCCCAAGTACCCCACCAAATACCAGTTCGTTTCATACCTTGAGTCATATGCTTCCCACTTCTCAATTCAACCCCGGTTCAATCAAACCGTCATGAGTGCAGAGTTCGACCAGAGTTGCGGCTTTTGGACGGTTCGAACCCAGGATTTCGAATACATTTCCCGGTGGCTTGTAGTGGCCACTGGTGAAAATGCGGAGCCGGTGATTCCTAAGATTTCTGGACTGGAGTCGTTCCATGGACCGGTTGTTCATACTAGTCTCTTCAAGTCCGGTTCTGATTACAAGAACCAGAGGGTTTTGATCATTGGGTGTGGCAATTCGGGCATGGAAGCAAGCTTGGATCTTTGCAGACACAATGCATTCCCTTTTATGGTTGCCAGGAACACTATACATGTTCTACCTAGGGAGATGTTTGGCTTCTCAACATTTGGAATTGCCATGGCCCTCCTTAAATGGTTCCCTTTAAGATTCGTGGACAAGTTTCTCCTGATGCTGAGCAGTTTCATCTTGGGAAACACCGATCGTTATGGTCTCCGGCGACCCAAAACAGGACCCCTTGAACTCAAAAACGCCACCGGAAAAACTCCTGTTCTAGACGTCGGAGCACTATCACATATCAAATCCGGGAAAATTAAGGTGATGCAGGGAGTGAAGGAGATAACGAGAAATAGTGTGAAGTTCGTGGATGGTCCAGAGAGAGAGTTCGATGCTATAATCCTAGCAACGGGTTACAGAAGCAACGTGCCTACTTGGCTCAAGGGGTGCGATTTTTTCACTGAGGATGGAATGCCGAAAACGCCCTTTCCAGAGGGTTGGAAGGGAGAGAATGGATTGTATACGGTGGGGTTCACCAGGAGAGGTCTGCTTGGAACCGCTTCTGATGCCACCAAGATCGCCCAAGACATCGCTCACCGGTGGAGGACCGTGAAGGACAGCAAGAACTATCGCAATTCCCATATTGTCCTACTCAAGAGCTCGAAATCCAATCATCAATGGGTAAAATCCAATAAAGATATGTAG 1272 0.4772 MGSYKDQEQEEQAKCAWVHGPIIIGAGPSGLAVAACLSQHGVPCVILEKSDCLASLWKHRTYDRLKLHLPKHFCELPLMGFPPNFPKYPTKYQFVSYLESYASHFSIQPRFNQTVMSAEFDQSCGFWTVRTQDFEYISRWLVVATGENAEPVIPKISGLESFHGPVVHTSLFKSGSDYKNQRVLIIGCGNSGMEASLDLCRHNAFPFMVARNTIHVLPREMFGFSTFGIAMALLKWFPLRFVDKFLLMLSSFILGNTDRYGLRRPKTGPLELKNATGKTPVLDVGALSHIKSGKIKVMQGVKEITRNSVKFVDGPEREFDAIILATGYRSNVPTWLKGCDFFTEDGMPKTPFPEGWKGENGLYTVGFTRRGLLGTASDATKIAQDIAHRWRTVKDSKNYRNSHIVLLKSSKSNHQWVKSNKDM 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0596 423 Gene3D - 21 396 IPR036188 -
Lele28g0596 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 22 395 - -
Lele28g0596 423 FunFam Flavin-containing monooxygenase 21 395 - -
Lele28g0596 423 SUPERFAMILY FAD/NAD(P)-binding domain 22 213 IPR036188 -
Lele28g0596 423 Pfam Pyridine nucleotide-disulphide oxidoreductase 22 211 - -
Lele28g0596 423 SUPERFAMILY FAD/NAD(P)-binding domain 181 391 IPR036188 -
Lele28g0596 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 21 40 - -
Lele28g0596 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 182 200 - -
Lele28g0596 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 178 202 - -
Lele28g0596 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 139 147 - -
Lele28g0596 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 20 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0596 Lele-ChrLele28 3814586 3816741 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0596 28 3814586 3816741 Lele01g0611 01 3585976 3589511 CCT
Lele28g0596 28 3814586 3816741 Lele02g0599 02 3588250 3597596 CCT
Lele28g0596 28 3814586 3816741 Lele03g0612 03 3598226 3605464 CCT
Lele28g0596 28 3814586 3816741 Lele04g0617 04 3728120 3735580 CCT
Lele25g0595 25 3787538 3789657 Lele28g0596 28 3814586 3816741 hybridization
Lele26g0609 26 3890764 3892915 Lele28g0596 28 3814586 3816741 hybridization