Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0564 ATGGCTGATGACAAAGGATTTGGAGAAGTTGAAAGCAAACAAACAAGTCCTACTGCCGCTGCAAGTAGAAAGAAGCGCCAGGGATTTATTTCCCGACTTTGGAATGGAATATTTAGATTACATGGAGATGATTTCGAAAAGAGACTGCAATACATTTCTAAAGAAGAAGCTGCTGTTTTGACTAGAATGAACAGGAGATCTCAATCCTGGAGGCAAACAACTCGGCATCTTATTGTGTTTTCGATTATATTTGAGGTCATTGCTGTAGGTTATGCTATTATGACGACAAGATCAGTGGATATGAATTGGAAGATGAGGGCATTCCGGGTCTTGCCAATGTTTCTTTTTCCCGCCTTGTCATCTGTTGCTTATTCAGCTGTTGTCAGCTTTACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGGCTTCGAGCTGAAAGACAAGCAAAAATTGATGAGCTCAAAGAGAAAACAAATTATTACACTACTCAACAGCTCATTCAGAGATATGATCCAGACCCGGCAGCAAAGGCAGCGGCAGCAACTGTTTTGGCATCTAAGTTGGGTGCAGATTCAGGCTTGAAAGTTTATCTAGGGGACGAATCAAACCACAGTGCTTCAACAGGGATGAGCAATGATGTCGAACTTGTACAAGCTAGTGGACTCCGAAATCGAAAACAAATGCAGTCTAGATATACTACTCCAGGGACAGCTACACCAAAGCTTCCTGTTCCTGATCAACAAATTGTTGGTTCTAGTGAAACTGAAGAAGGTCCCACTTCTGAGCATAACCAGCTTGTAGTTGTAGAGCACCACCAACCTCAGAGTTCATCCACAAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTCGTGGGTGAGGATCCAACGCAGTCTTATGCACTTATATGTGGTAACTGCCATATGCATAACGGTCTTGCTCGGAAAGAGGATTTCCCTTTCATCACTTACTATTGCCCGCACTGTCAAGCGTTGAACAAGCCTAGGAATTCAGACGAGGGTGTCTCTACTTTGAATTCCCCAAAAATGGAGCTGCGAAAAACAGACGTTGTTGACGCGGTTAAAAATACCTTGGATTCTGCTGGCGACATCTTAATCACAAACAATAGTCCCGCTGATTCTCGTGCCGAGATCGAGGAAATACCTGAAAGGCCAGATTTGGGGGAGAAAGCTAGCTAA 1209 0.4359 MADDKGFGEVESKQTSPTAAASRKKRQGFISRLWNGIFRLHGDDFEKRLQYISKEEAAVLTRMNRRSQSWRQTTRHLIVFSIIFEVIAVGYAIMTTRSVDMNWKMRAFRVLPMFLFPALSSVAYSAVVSFTRMCDRRDQKILERLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYLGDESNHSASTGMSNDVELVQASGLRNRKQMQSRYTTPGTATPKLPVPDQQIVGSSETEEGPTSEHNQLVVVEHHQPQSSSTNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYYCPHCQALNKPRNSDEGVSTLNSPKMELRKTDVVDAVKNTLDSAGDILITNNSPADSRAEIEEIPERPDLGEKAS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0564 402 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 23 370 IPR040115 GO:0071786
Lele28g0564 402 MobiDBLite consensus disorder prediction 373 402 - -
Lele28g0564 402 MobiDBLite consensus disorder prediction 1 23 - -
Lele28g0564 402 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 286 336 IPR019273 -
Lele28g0564 402 MobiDBLite consensus disorder prediction 386 402 - -
Lele28g0564 402 Coils Coil 139 162 - -
Lele28g0564 402 MobiDBLite consensus disorder prediction 224 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0564 Lele-ChrLele28 3596664 3599818 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0561 25 3568232 3573022 Lele28g0564 28 3596664 3599818 hybridization
Lele26g0575 26 3656636 3665724 Lele28g0564 28 3596664 3599818 hybridization