Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0549 ATGGCTGATTCAGTGCATGCTAGCAGCGATGATAAAATTCAGAATTTGATTTCCGCTAAGAAGTCATTGAAGCTTAGCCTTGAGAAGTCAAAGTCCCTAGGGTTCGCTTTGGAGAAGGCTGGGCCTAGATTGGAGGAGATTAGCCAGAGATTGCCTTCCCTTGAATCTGCAGTTCGCCCCATTCGTGCTGACAAGGACGCCCTTGCGGCTGTTGGTGGACACATTAATCGAGCAGTTGGCCCTGCAGCTGCCGTGCTCAAGGTTTTTGACGCTGTTCATGGCCTCGAAAAGTCACTCTTATCTGATCCGCGTAATGATCTCCCGGGTTATTTGTCAGTGTTGAAGCGTCTCGAAGAGGCACTGAGGTTCTTGGCAGATAACTGTGGATTGGCAATTCAGTGGTTGGAGGATATAGTGGAGTATTTGGAAGATAATACTGTTGCTGATGAAAGGTATCTGTCAAATTTGAAGAAATCACTTCAAAATCTTCGTGAATTGCAAAATGAAGAGGGAAAGGCTCGACTGGATGGTGGGCTTTTAGAAGCAGCTTTGCGAAAACTGGAAAATGAATTCCGGCAGCTATTGACTGAAAACAGTGTTCCACTTCCAATGTCACCATCGCCTACGCTTGCTGATCAGGCATGCATTGCTCCTTCACCTTTACCAGTATCTATTATTCACAAGTTGCAAGCAATTCTTGGCAGATTGATTGCTAACAATAGACTTGACAAGTGCATATCAATTTATATTCAAGTCCGTAGTTCAAATGTCAGAGCAAGCTTGCAGGCTCTCAATCTGGATTACCTTGAGATCTCAATAGCTGAATTCAATGATGTGCAGAGCATTGAGGGATATATAGCCCAATGGGGAAAGCATTTAGAGTTTGCAGTGAAGCATTTGTTTGAAGCTGAGTATAAACTTTGTAACGATGTATTTGAGAGGATTGGATTGGATGTTTGGACGGGCTGCTTTTCAAAGATAGCTGCACAGGCCGGTATACTAGCATTTCTTCAATTTGGGAAGACTGTTACAGAGAGTAAGAAAGATCCCATCAAACTTTTAAAGCTATTGGACATATTTGCATCTCTGAACAAATTGAGATTGGATTTCAACCGCCTTTTTGGGGGAGCAGCATGTGCTGAAATTCAGAACTTGACTAGGGATCTAATCAAGAGAGTGATTGATGGGGCAGCAGAGATTTTCTGGGAACTCCTGGTCCAGGTAGAGTTACAGAGACAGAATCCCCCTCCTCTTGATGGTAATGTCCCAAGATTGGTGAGTTTCATTACTGATTATTGTAACAAACTCCTAGGGGATGACTATAAGCCAATATTGATCCAAGTCCTTGTCATACACCGGAGTTGGAAACGCCAGAGCTTTCAGGAGAGTCTCCTAGTGAATGAGGTTTTAAACATTCTAAAAGCCGTAGAATTGAATTTGGAGACATGGATCAAGGCTTATGATGATCCTATGTTATCGAACTTCTTTGCTATGAACAATCACTGGCATCTTTACAAGCACTTGAAAGGAACAAAGCTGGGGGATCTCTTGGCGGATTCTTGGCTGAAAGAACATGAACAGTACAAGGACTATTACTCCACAATTTTCTTGAGGGATAGCTGGGGAAAGCTTCCTGGTCATTTGAGCCGGGAAGGGCTGATTCTGTTCTCAGGAGGCCGTGCTACTGCTCGTGATCTGGTCAAGAAAAGGTTGAAAAAGTTCAATGAAGTTTTTGATGAGATGTATACAAAGCAGTCGAGCTGGGTTATGCCAGAACGAGATCTGAGAGAGAAAACAACCCACCTTATAGTGCAAGCTGTGGTTCCTGTTTACCGGAGTTACATGCAGAATTATGGACCCTTGGTTGAGCAAGATGCCAGCTCCTCAAAATATGCTAAATACAGTGTGCAGAAGCTGGAGGAAATGCTCTCGTCTCTTTATCAGCCGAAGCCTGTGAGACACGCCAGTTTGAAAGGTCGGCAATTCAGTGAGAAATTTGGCAATCAAATGGTGGATCTTCGTCGCACGGCCTCTGCAGTTGTGTAA 2046 0.4389 MADSVHASSDDKIQNLISAKKSLKLSLEKSKSLGFALEKAGPRLEEISQRLPSLESAVRPIRADKDALAAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALRFLADNCGLAIQWLEDIVEYLEDNTVADERYLSNLKKSLQNLRELQNEEGKARLDGGLLEAALRKLENEFRQLLTENSVPLPMSPSPTLADQACIAPSPLPVSIIHKLQAILGRLIANNRLDKCISIYIQVRSSNVRASLQALNLDYLEISIAEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWTGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACAEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNPPPLDGNVPRLVSFITDYCNKLLGDDYKPILIQVLVIHRSWKRQSFQESLLVNEVLNILKAVELNLETWIKAYDDPMLSNFFAMNNHWHLYKHLKGTKLGDLLADSWLKEHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWVMPERDLREKTTHLIVQAVVPVYRSYMQNYGPLVEQDASSSKYAKYSVQKLEEMLSSLYQPKPVRHASLKGRQFSEKFGNQMVDLRRTASAVV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0549 681 FunFam Exocyst subunit Exo70 family protein 135 653 - -
Lele28g0549 681 Coils Coil 149 176 - -
Lele28g0549 681 SUPERFAMILY Cullin repeat-like 85 647 IPR016159 -
Lele28g0549 681 Gene3D Exocyst complex component Exo70 136 655 - -
Lele28g0549 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 106 643 IPR004140 GO:0000145|GO:0006887
Lele28g0549 681 Pfam Exo70 exocyst complex subunit 288 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0549 Lele-ChrLele28 3496419 3498464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0549 1 681 EXO70 exocyst subunit family AT4G31540 75.472 0.0 1075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0542 25 3454492 3456537 Lele28g0549 28 3496419 3498464 hybridization
Lele26g0559 26 3557926 3559971 Lele28g0549 28 3496419 3498464 hybridization