Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0541 ATGTGGTTGCCGAAGAATCAAGCGGAGAAGAAGGACGGAGTTCAGGGGATAGTGGCAGTGGCAATAGACAGAGACAAAGGAAGCCAGAATGCACTCAAATGGGCCATTGATCATATCCTTGTACGAGGATCCACCGTTGTTCTTATCCATGTCAAGCTTAAGCCATCTACATCGTCTGCATCGCCTTCTCTTCAAGCCCCAAGGGCTAATGTTGCCGGTGACGAGAGTTCTCTAGTATGCAAAGATCCTGATCCTCAAACCAGAGAAATTTTCCTCCCATATCGTGTCTTCTGTACACGCAAAGATATACAATGTAAGGACGTTATACTCGAAGACATAGATGTATCTAAAGCATTAATCGAATATTCTTCACATACAGCAATCGAACATTTGGTTCTTGGTGCGTCTTCCAAAACTGGTCTGCTTCGAAGATTCAAGACAACGGATATTCCAGGAACTGTGGCCAAAGGGGCACCAGATTTTTGTAATGTGTATGCTGTTGCAAAAGGAAAAATTCATTCAATGAGATCAGCAACTCGTTCTGCTCCTGCAATTTCTCCTCTACGAAACCAGCTTACTCAACCGAGCATCAAGTCTGAACACTCAGACCCTGGACCAGGACCAGGAGTACCTCCAACCAATAATAATATGAGAGGATGTGATAATAGGCCGTATAAATCGCAGGAAGAATCAGAATTCTTTAGGTCACCATTCACAAGGAGAGGTATGAATGGGAAGTCATATGGGGAACTCTCAGTACCAGATACTGACATATCCTTTGTGAGTTCTGGTGGTGGAAGGCCAAGTACAGATCGCATGTTCCCTTCATTATTTGATACGGCAGATGCTGGATTCTCCAACCCTCGCCTATCATATAGCTCAGAACCAGATAACTGTGGCTTCGAGTCGGCCTTGCAGTTTGGGAGAAGGTCTGTGGAAATGGTCAGCCCTCCTCCTGAATTCTCATCAAATTCACAGGATTGTGACAGACTTTCTTCTTCATCAGGCCTGGATGATGTGGAGGCTGAAATGAGGAGACTGAAGTTGGAGCTCAAGCAAACAATGGAAATGTACAGCACAGCTTGTAAAGAAGCTCTCTCAGCAAAACAGAAGGCGATAGAACTTCAGCGATGGAAGTTAGAGGAAGAGCGAAGATTAGAAGAGGCGAGGCTAGCGGAGGAAGCTGCTTTGGCAATTGCAGAGAAGGAGAAGGCTAAATCCAAAGCAGCTCTTGAAGCTGCTGAGGCACAAAAGAGAATAGCAGAACTGGAAGCACAAAAAAGACTGAGTGCAGAAATGAAAGCACTCAGAGAAGCAGAAGAGAAGAAGAAAGCATTAGATGCTTTAGTAAATATAGATGTCAGGTATAGAAAGTATTCCATTGAGGACATTGAAGCTGCAACCCAGTTCTTCCAAGAGTCACAGAAAATTGGAGAAGGTGGTTATGGTCCGGTTTACCAGTGCTATCTGGACCATACACCTGTTGCAGTTAAGGTTCTACGTCCTGATGCAGCACAAGGAAGATCACAGTTTCAACGAGAAGTTGAGGTACTGAGTTGCATACGGCATCCAAACATGGTTCTTCTCCTAGGAGCCTGCCCGGAATATGGATGTCTTGTTTATGAATTCATGGCTAATGGAAGCTTGGACGATCGTCTTTTTCGCCGAGGAAACACTCCATCAATTTCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATAGGCACTGGCTTATTGTTCCTTCACCAGACAAAACCAGAGCCTCTGGTCCACAGGGACTTGAAACCAGCTAACATCTTACTCGACCGAAATTACGTAGCCAAGATCAGCGACGTAGGTTTGGCCAGGCTGGTCCCACCATCTGTAGCCGACAATGTCACACAATACCGCATGACATCAACTGCAGGAACTTTCTGCTACATAGATCCAGAATATCAGCAAACAGGAATGTTAGGGGTAAAATCAGACATATATTCCCTTGGGGTCATCTTCTTGCAGATAATAACAGCAAGACCACCAATGGGTTTGACTCATCATGTTGAAAGAGCCATTGAAAAGGGAACATTCAAGGAGATGTTGGATCCAACGGTGCCTGATTGGCCAGAAGAAGAGGCCTTGAATCTTGCAAATTTGGCTCTCAAGTGTGCAGAGTTAAGGAGGAAGGATAGGCCTGATCTGGGAAAAGTCATATTGCCAGAACTAAACAGAATGAGAATGCTTGCTGAAAGTACTAATCACCATTCAATTACGAGTGGCTATTTAAGTCCTCCCAATCTGAGCCTAGCTTCAATGCCGGTGGTGCAGGATCAACCCGGTTACTCTGGGGAGGGCACAGGAAATAGATCAAGTCCTGCTTGA 2358 0.4508 MWLPKNQAEKKDGVQGIVAVAIDRDKGSQNALKWAIDHILVRGSTVVLIHVKLKPSTSSASPSLQAPRANVAGDESSLVCKDPDPQTREIFLPYRVFCTRKDIQCKDVILEDIDVSKALIEYSSHTAIEHLVLGASSKTGLLRRFKTTDIPGTVAKGAPDFCNVYAVAKGKIHSMRSATRSAPAISPLRNQLTQPSIKSEHSDPGPGPGVPPTNNNMRGCDNRPYKSQEESEFFRSPFTRRGMNGKSYGELSVPDTDISFVSSGGGRPSTDRMFPSLFDTADAGFSNPRLSYSSEPDNCGFESALQFGRRSVEMVSPPPEFSSNSQDCDRLSSSSGLDDVEAEMRRLKLELKQTMEMYSTACKEALSAKQKAIELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAALEAAEAQKRIAELEAQKRLSAEMKALREAEEKKKALDALVNIDVRYRKYSIEDIEAATQFFQESQKIGEGGYGPVYQCYLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLDDRLFRRGNTPSISWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGVIFLQIITARPPMGLTHHVERAIEKGTFKEMLDPTVPDWPEEEALNLANLALKCAELRRKDRPDLGKVILPELNRMRMLAESTNHHSITSGYLSPPNLSLASMPVVQDQPGYSGEGTGNRSSPA 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0541 785 Coils Coil 363 449 - -
Lele28g0541 785 ProSiteProfiles Protein kinase domain profile. 471 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0541 785 FunFam U-box domain-containing protein 51 544 744 - -
Lele28g0541 785 SMART serkin_6 471 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0541 785 MobiDBLite consensus disorder prediction 314 336 - -
Lele28g0541 785 Gene3D Phosphorylase Kinase; domain 1 450 543 - -
Lele28g0541 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 145 - -
Lele28g0541 785 SUPERFAMILY Protein kinase-like (PK-like) 454 729 IPR011009 -
Lele28g0541 785 Gene3D Transferase(Phosphotransferase) domain 1 544 751 - -
Lele28g0541 785 MobiDBLite consensus disorder prediction 179 200 - -
Lele28g0541 785 PANTHER OS02G0152300 PROTEIN 18 749 - -
Lele28g0541 785 MobiDBLite consensus disorder prediction 317 333 - -
Lele28g0541 785 Coils Coil 337 357 - -
Lele28g0541 785 Pfam Universal stress protein family 18 145 IPR006016 -
Lele28g0541 785 MobiDBLite consensus disorder prediction 178 250 - -
Lele28g0541 785 Gene3D HUPs 17 159 IPR014729 -
Lele28g0541 785 CDD STK_N 17 170 - -
Lele28g0541 785 Pfam Protein kinase domain 471 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0541 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Lele28g0541 785 MobiDBLite consensus disorder prediction 760 785 - -
Lele28g0541 785 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 443 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0541 Lele-ChrLele28 3447155 3450521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0541 1 765 Receptor kinase-like Gene Family AT1G78940 56.361 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele28g0541 Pkinase 2.4e-41 CL0016