Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0538 ATGGCTCACCACAGAGCCTATCATCATGGGCTTCTCGTCTTGCTCATCACCTTCTTCGCCCTATTCGTCTGCTTTGTGCCGTGTTTCGGTGATGATCCTCAGGTTCTGACCAAGTTCAAGAGCTTCTTGTCCAATGCTGATTCCTTGTCCAACTGGAACGAATCTGTAAACATCTGTAATTGGAAAGGTGTCAAATGTCGCAAACGAGGGTTTCACTTGATACTCGACAACATGGGACTGAGTGGCACTATTGATATTGATACCTTGTTGGAATTATCCAATTTGCAGTCCTTTAGCGCCAAAAACAACAGTTTTGAAGGTAACATGCCTGGTTTTAACAGGATTGGGAGGTTGAAGGGGCTGTATTTGTCCCACAACAAGTTCTCTGGAGACATTCCTGATAATGCTTTTGAAGGTTTGAAATATCTGAGCAAGGTATACTTGGCAGAAAATGAGTTCACAGGTCGTATTCCTAGTTCTCTTGCTGAATTGCCCAACCTTTTGGATTTGGACTTACATTCGAATCGTTTTGAGGGAAACATACCAGAGTTTCGAACCAAAAATAAGTTCAGAGTTTTCAATGTATCCGACAACCTGCTCCAAGGTAAAATACCAGGAAGTGCCAACAACGGCGATCCCAGCTCATATAATGTCATACAAAGTAAGCAGAAGCTGTATGCACGTTTATGCCTGAGGCCCCAGTATCTGAATGCAGAGACTAATGGCAAAAAGTCCTCCTCAAGGAAGCGAGACATTCTTATAACTGCTATAGTAGTGGTGGCTGTGATATTATCGGCTTCAATTATAGCAACTTTATTTGTTCTTCGTCGTCGGCGGCGCCGGAGGCAAAGACTTTCTAATTCTCCGACGAGAACTACTACGGTTCACCAAGCGCAATATCAAAACAGTGAACCCTTAGTAATTAAGGAGACTCCGCCTCCACCGTCACTTGATCTGACAGCTGAATTCAGCAAGGGTGAGAACGGAGATTTGAACTTTGTTACCAAAGACACACAGAGATTTGAACTGCAAGATCTTCTCGGAGCCTCGGCAGAAATTATGGGCAGTGGCAGTTTTGGATCCACGTATAAAGCTATTGTTCTTAATGGACCCGCCGTGGTGGTGAAGAGATTTAAACACATGAACAGTATCGGGAAAGAAGAGTTCTTTGAGCACATGACAAGGCTCGGAAGCTTGAACCACCCTAACCTTCTTCCTCTTGTTGCTTTCTACTACAGAAAAGAAGAGAAGCTTCTGGTTTATGACTGGGCTGAAAATGGCAGCTTGGCCAGTCATCTCCATGGTAGGAGTGGTTCTGGGTTAGATTGGCCAACCCGGTTGAAGATCATAAAAGGAGTAGCGAGAGGATTAACTTATCTCTACAGAGAATGCCCAGAACAAAAGCTTCCACATGGACATCTGAAATCCTCGAATGTTCTACTAGATCAGTCAATGGAGCCTCGTTTGACAGAGTACGGGCTCGTGCCAGTGATGAACAAGAGCCATGCTCAACAGTTCATGGCGGCATACAAGGCCCCGGAGGTGAACCAATCCGACGGACCCAACCAGAAGACCGACGTGTGGTGTTTGGGGATTCTGATTCTGGAACTTCTGACGGGGAAATTCCCGGCAAATTACCTACGACATGGGAAAGGAGAGAACTCGGACCTGGCCACGTGGGTGGATTCGGTGGTGAGAGAAGAGTGGACAGGGGAGGTGTTTGATAAGGATATTCTAGGTACGAGGAATGGAGAGGGAGAGATGCTGAAACTATTGAAGATAGGAATGTATTGTTGTGAATGGGACGTGAAGAATCGGTGGGATTGGAAGGAGACGATGGGGAAGATTGAGGAATTGAAGGAGAAGGATAGTGAAGAAGATTTCTCTTCTTTTAATAACAGTGAAGCCGATCTCTCCTCCTACTAG 1926 0.4543 MAHHRAYHHGLLVLLITFFALFVCFVPCFGDDPQVLTKFKSFLSNADSLSNWNESVNICNWKGVKCRKRGFHLILDNMGLSGTIDIDTLLELSNLQSFSAKNNSFEGNMPGFNRIGRLKGLYLSHNKFSGDIPDNAFEGLKYLSKVYLAENEFTGRIPSSLAELPNLLDLDLHSNRFEGNIPEFRTKNKFRVFNVSDNLLQGKIPGSANNGDPSSYNVIQSKQKLYARLCLRPQYLNAETNGKKSSSRKRDILITAIVVVAVILSASIIATLFVLRRRRRRRQRLSNSPTRTTTVHQAQYQNSEPLVIKETPPPPSLDLTAEFSKGENGDLNFVTKDTQRFELQDLLGASAEIMGSGSFGSTYKAIVLNGPAVVVKRFKHMNSIGKEEFFEHMTRLGSLNHPNLLPLVAFYYRKEEKLLVYDWAENGSLASHLHGRSGSGLDWPTRLKIIKGVARGLTYLYRECPEQKLPHGHLKSSNVLLDQSMEPRLTEYGLVPVMNKSHAQQFMAAYKAPEVNQSDGPNQKTDVWCLGILILELLTGKFPANYLRHGKGENSDLATWVDSVVREEWTGEVFDKDILGTRNGEGEMLKLLKIGMYCCEWDVKNRWDWKETMGKIEELKEKDSEEDFSSFNNSEADLSSY 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0538 641 MobiDBLite consensus disorder prediction 622 641 - -
Lele28g0538 641 Gene3D Transferase(Phosphotransferase) domain 1 424 639 - -
Lele28g0538 641 Gene3D Ribonuclease Inhibitor 27 246 IPR032675 -
Lele28g0538 641 FunFam Pollen receptor-like kinase 1 424 630 - -
Lele28g0538 641 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 625 - -
Lele28g0538 641 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Lele28g0538 641 Gene3D Phosphorylase Kinase; domain 1 317 423 - -
Lele28g0538 641 Pfam Protein kinase domain 352 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0538 641 ProSiteProfiles Protein kinase domain profile. 348 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0538 641 SUPERFAMILY Protein kinase-like (PK-like) 352 616 IPR011009 -
Lele28g0538 641 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Lele28g0538 641 SUPERFAMILY L domain-like 28 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0538 Lele-ChrLele28 3432788 3435332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0538 15 619 Receptor kinase-like Gene Family AT4G31250 44.444 4.27e-176 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele28g0538 Pkinase 6.5e-31 CL0016