LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g0529	ATGGAGCAAAAACCGGCCCTTGTCATGGCTCCATGCCCTTCGATTCAATCTGTTACCGCGTCCTCCATGTACCCCGGCGGCGGCGATTTCCCCCCGATCCCGTCGGAGTTGGATGCGGAAGAGCTTATTATGGCGATCGTGAACGGATCCGTGATCGACGAGGACGTGAAATCGGGCGAGTTCACTTGTCAGACAGTCAACAGAGGTTTCGCCGGCGGTGCGGATGCATACTTCGGCGGCGCTAGCTTCGATGACCTTCAGGCCGCTTTGGAAACCGTGAGTGAATTTTCAGCTTATGGTGGACTAGAAGATGACAACAATAGTGGCGGGGCCCAGAACATCACTCCCGCTGATGGTTCTCCTATTTCTTGCATCACTGAGGCTCAGTCATCGATTTGTGGTACTGTTGGAAGCCCTATGTCAACTAATAAACCAGACCCAGGAGATAATCAAACAAGAGGAGCTTCAAGTGGTGAGCAGTCTGACGAGGATGATGAAACAGGTCCTTTCGAACAGATCATAGATCCCATTGTTAAGCGGGACAGAAGGAAGAAATCTAATCGGGAGTCTGCAAGGAGATCGAGAAGAAGAAAACAAGCGCACTTGGCTGACCTTGAGACGCAGGTTGAGCAACTGAGGGTGGAAAATGCAACTCTATCCAAGCAGCTTGTAGATGCTGGTCAACATTTTCGTGAGGCTGATACTAATAACCGAGTGCTGAAATCAGACGTGGAAGCCTTGAGAGCTAAGTTGAAGTTGGCTGAAGACATGGTGGCTCGTGGCTCTTTAACGACCTTAAACAACCAGCTTCTTCAGACTCCGAGTCACCATCTGAACGCACATAATCTGCTGGGAACGGCACACGTGTCTCCAACCATTACTGTGCATGGAAACGATGCCTCGTCATATGCTGCCACCATGACGGTTGGTGCTCAGAATTCAGGTCTTGCACTTGATCAGAACTTAGATATCACCAATAACACTTTCAACCCCTGGGGTCTCAAGTGA	1008	0.502	MEQKPALVMAPCPSIQSVTASSMYPGGGDFPPIPSELDAEELIMAIVNGSVIDEDVKSGEFTCQTVNRGFAGGADAYFGGASFDDLQAALETVSEFSAYGGLEDDNNSGGAQNITPADGSPISCITEAQSSICGTVGSPMSTNKPDPGDNQTRGASSGEQSDEDDETGPFEQIIDPIVKRDRRKKSNRESARRSRRRKQAHLADLETQVEQLRVENATLSKQLVDAGQHFREADTNNRVLKSDVEALRAKLKLAEDMVARGSLTTLNNQLLQTPSHHLNAHNLLGTAHVSPTITVHGNDASSYAATMTVGAQNSGLALDQNLDITNNTFNPWGLK	335

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g0529	335	PANTHER	BASIC LEUCINE ZIPPER 63	111	316	-	-
	Lele28g0529	335	CDD	bZIP_plant_GBF1	193	231	IPR045314	GO:0003700\|GO:0006355
	Lele28g0529	335	MobiDBLite	consensus disorder prediction	135	204	-	-
	Lele28g0529	335	SUPERFAMILY	Leucine zipper domain	179	223	IPR046347	GO:0003700\|GO:0006355
	Lele28g0529	335	Gene3D	-	178	231	-	-
	Lele28g0529	335	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	179	223	IPR004827	GO:0003700\|GO:0006355
	Lele28g0529	335	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	182	197	IPR004827	GO:0003700\|GO:0006355
	Lele28g0529	335	Pfam	bZIP transcription factor	178	223	IPR004827	GO:0003700\|GO:0006355
	Lele28g0529	335	Coils	Coil	237	257	-	-
	Lele28g0529	335	Coils	Coil	188	222	-	-
	Lele28g0529	335	MobiDBLite	consensus disorder prediction	135	157	-	-
	Lele28g0529	335	FunFam	BZIP transcription factor	178	228	-	-
	Lele28g0529	335	SMART	brlzneu	175	239	IPR004827	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g0529	Lele-ChrLele28	3386334	3389275	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g0529	121	318	bZIP Transcription Factor Family	AT5G24800	53.333	8.88e-53	173

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele28g0529		bZIP_1	1.7e-12	CL0018