Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0527 ATGAGGAAGAGCTACATCTATGAAGGCAGTGGGAGAGGAAGAGCATCTCGTTCTGTTGCGCAGGACCTTCGAATGACCTTCAGCAGTGAACGGTGGAGGGCGAGAGATTCTAAGGAGATCAAGACAGAGAGTGAATGGCAGTGAAACATATCATTTGGTGATTGTCATTCTGTAACTTTATCTGACCGTGTAAGGGTAAAAGGGAAAGGTGTTGAACATAAGAGGCAGTCCAACAAAGATGACTTGATGCAGCAGCCTCAAGTTGAAGCAGCTGGTAAGGATGAGGAAGGAAGAAAGACGGAAAATCAAAAGCATTTTATAAGATGTCAAGGCCCTAGTGAGAGACTATCTTTGATATCCCTTGAAAAAATCAAGATCAAGAACTATAAAGCATCAAAACCCCATTTGAGGAAGAGTTTCCACTCCATGCAAAAGAAAGAGAAGGAAGCAAGGAGAGAAGGGAGGGATAGGGAAATGGAAGGAAAGGAGGAAACCCTACCTCCTGGCTTTCGATTTCATCCCACAGACGAAGAACTCATCACTAGCTATCTCGTCAACAAGATCTCTGATTCTTCTTTTACTGCTCGAGCTATCACTGATGTCGATCTCAACAAATGCGAGCCATGGGATCTCCCTGGCCGAGCCCCCCGAGGTGAGAAATCCAACTGGGTCATGCACGAATACCGTATCCACTCCAAATCCTCCTTCAGACTCCACAACAAGCAGGATGAATGGGTGGTTTGCAGAGTGTTCCAGAAGAGTGGTGGAGCCAAAAAATACCCTTCCGATCACACAAGAGGGCTGAATCCATATAGCCTCGACATAGCTCCTAACATTGTGGGACCTTCAATGATGCATATGGCGGATCCTAATTCTGGTCACTTCCTCTACGGAAGGAACTATGTCAACAGTGCTTCTGACCTAGCAGAGGTCGCTAGGGTTTTGAGAGCAGCAGGGGGGTCTGCTTCAACCTCTGGTCTCAACATCCCAATGCAACCCTATGCTCAGCTTAACTATCCGGGGCCGCCTGCAGCCGGAGGGTTTACGATTTCCGGCCTCAACTTGAATCTCCCCGGAGGAGGAGGAGCCGCCGCCACCGGGCAACCTGTTTTCCCGCCGATGAACCCACATGATGTGGGCTCCAACATGATGACAGCTGGCAGTTCTCTTAATGGAGGAGATCATCATGTAGGGTACGGTGCAGCAGAAATCAGCAACCCTAATAATATTGGTCCAAGCAACAGGTTCATTGGGATGGAGCATTGTGTCGATTTGGATAACTACTGGCCTTCCTACTAA 1299 0.4811 MRKSYIYEGSGRGRASRSVAQDLRMTFSSERWRARDSKEIKTESEWQXNISFGDCHSVTLSDRVRVKGKGVEHKRQSNKDDLMQQPQVEAAGKDEEGRKTENQKHFIRCQGPSERLSLISLEKIKIKNYKASKPHLRKSFHSMQKKEKEARREGRDREMEGKEETLPPGFRFHPTDEELITSYLVNKISDSSFTARAITDVDLNKCEPWDLPGRAPRGEKSNWVMHEYRIHSKSSFRLHNKQDEWVVCRVFQKSGGAKKYPSDHTRGLNPYSLDIAPNIVGPSMMHMADPNSGHFLYGRNYVNSASDLAEVARVLRAAGGSASTSGLNIPMQPYAQLNYPGPPAAGGFTISGLNLNLPGGGGAAATGQPVFPPMNPHDVGSNMMTAGSSLNGGDHHVGYGAAEISNPNNIGPSNRFIGMEHCVDLDNYWPSY 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0527 432 MobiDBLite consensus disorder prediction 138 172 - -
Lele28g0527 432 Gene3D NAC domain 175 213 IPR036093 GO:0003677|GO:0006355
Lele28g0527 432 MobiDBLite consensus disorder prediction 142 171 - -
Lele28g0527 432 Pfam No apical meristem (NAM) protein 167 215 IPR003441 GO:0003677|GO:0006355
Lele28g0527 432 MobiDBLite consensus disorder prediction 364 387 - -
Lele28g0527 432 Gene3D NAC domain 214 257 IPR036093 GO:0003677|GO:0006355
Lele28g0527 432 SUPERFAMILY NAC domain 163 253 IPR036093 GO:0003677|GO:0006355
Lele28g0527 432 MobiDBLite consensus disorder prediction 69 99 - -
Lele28g0527 432 ProSiteProfiles NAC domain profile. 166 317 IPR003441 GO:0003677|GO:0006355
Lele28g0527 432 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 163 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0527 Lele-ChrLele28 3366400 3374675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0527 213 432 NAC Transcription Factor Family AT2G24430 37.500 8.30e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele28g0527 NAM 8.1e-13 No_clan