Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0514 ATGGAAGGGGACAGGACAACGCCTGCTTCATCTGACGGGCTCAGTGATGGTGCCCAGAAAATAAAAGCACTGCATGGGCGGACAACTGGCCCTACAAGGCGTTCTACCAAAGGACAGTGGACGGCTGAAGAGGATGAGATTTTGCGGATGGCTGTTCAGCGTTTTAAAGGAAAGAATTGGAAAAAGATAGCGGAGTGCTTTAAGGATAGAACAGATGTACAATGCCTACATAGATGGCAAAAAGTCTTAAACCCTGAATTGGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATAATTGATTTAGTGAATAAATATGGGCCAAAAAAGTGGTCAACCATCGCACAGCACCTACCTGGACGCATAGGTAAACAATGCCGAGAAAGGTGGCACAATCATCTTAATCCTACTATAAATAAGGAAGCGTGGACGTACGAAGAGGAGCTGGCTCTAGTACGTGCTCATCAAATTTATGGGAACAGATGGGCAGAATTGACAAAGTTCTTGCCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGTTCAGTAAAAAAGAAATTGGATTCTTACTTGGCATCAGGTTTGCTTACTCAATTCCAAGATGTACCCCTTGCTGGACATCCAAATCAACCGGTGGTTTCTACGTCTTCAAGGCGGCAGTATAGTGGAGATGATAATGGTTATAAGGGCACTGAAGGAGAGGAAGTTTCCGAGTGTAGCCAAGATTCGGCTAATGTTAGTTGCTTCCCATCTGCTAGAGATATGACCGATGTTATATTAAATACTACAGAGGAACTAAAGCCAAGTGAAGATATCAGTCTGGGAAAGTCGCAGAGTCCTAGTCAAGCATCTTGTCTAGACCCATATTGCATTTCTCTGGATGACGTTACAATATCCATTCCGGACGTTGCTCATGAAGATGCTTCTTGTTCTGGTTTCATTGAGCAAACATACTCACATGATCCTGGAAATTCTGCAAGCAGGGATACTCAGTTTACCTTACATGCCCTCCCTAACATTTCTTCATCAGACTTGGATCAAGAATGTTCACTTCTGCGAAGGGACAGTGAAGATTGCGCTGAAAGCCATGACATTGTAAGCGTTCCATTGCATACTTCAGTGGGATTAGGTATTTCAGCATCCATGGGACCCCTATCAATAGATCCTGCGAAACAAGACCACATGTTAATATCTAGCGAAGAATGCTATAGAGTCCAATATTCAGAGGCAATAAATGATGGATGCTTTTCTTCAGGAGATTATAACAAAAATGTTAATACAGTTTCATCCGGATTGGCATTATTTGCCCAATCATCTGACCTCCATATACCTGAGACTGGTGGAACCTCAACTTCATTCCAAACTTGTCCCGTAAAATCTAATGATTTAATAGGATCTTCATGCTCTCAATCTCCGATGCTTTCTGCTAATGATTGGAGATTAGTGTATACAGCTGAAGCCAATAATCTATTTGGTGCTGATGATCTGCAATTTGTCTCCAGAGCTCAGGATAGCTTCATTTATGCTAACAACTCATCTGTTGCTCCTTGTATGGATGCTATAAATAGTGTAGAAATGCACGAGGGACAAGATACTGTGAAGGATGCTTCAAGATTGGTGCCTTTAAATACATTTGGCAGTGCATTAGATGCCAAGCGTACTTGTCCAATGGAAGAAAGGACCGATGTGCATATAGAACAGTCAGAGACCGGAGCTCTATGTTATGAACCGCCTCGATTCCCAAGTTTGGATATTCCCTTCTTAAGCTGTGATCTTATACAATCAGGAGGGGATATGCAACAAGAATTTAGTCCGCTGGGTATCCGCCGGCTTATGATGTCATCTATGAACTGTCCAACTCCCCTGAGGCTGTGGGATTCACCTTCTCGTGGTGATAGCCCAGATTCCTTGTTGAAAAGTGCTGCTAAAAGTTTCACTTGTACACCATCCATATTGAAGAAACGACACCGAGACTTGTTGTCACCTCTATCGGATAAGAGAATCGACAAGAAACTTGAGACTGACTTGACGTCCACGTTGGTTACACATTTTTCACGTTTGGAAGTCATGTTTGACGATAATGAGACTCGGGAAGTAGATATGCTTTCTCAACCTTTAACGGAGAACGAGAAATCTGAAGCAACTGTTGAGGATACCGAGAATTTCGGACAATCTTTGGAAGGAGAACATGCAGGGGGAAGAAATGAATCTACAATTAGCAACAAAAAGTCAGAAAAAGAGACAGCTGACAGCGATCCTCAGGATTTCCAACGACCTTCTTACGATGATTCGAAGATGAAGGTTGATTGTGACGTTGATAAAGCAGCTGAGATTGGGCAACAATCTTCTGGAGTCTTGATTGAACACGATATGAACGACTTGCTATTATATTCTCCTAATCAAATGTGTTTCAAACTAGACAGAACTCATTGTTCAAGTGCTAAAACTCCAAAAAACATGAACAACAGAAGTTTGGAAGCATCTTTAAATAAGAGCATTTCTTCACATCCATGGCCAAGTGATGGCTTCCCTTCTGTTCGTGTAAAAAATCTTGACGTTTCTTCATTTCCAGTTCCTTGCGTATCATCTCTTTGTGCATCAGCACCTGCGGAGAACCTTGGTGATCAGCCAGGAAATGATGCTGGTTTCGACACATTTAGCATATTTGGCGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCAGCATGGAAGTCTCCCTGGTTGATGAACACTTTCTTGCCAAGCCCCAGACTTGATACTGAAATAACAATCGAGGATTTTGGGTTTTTCATGAGCCCCCGCGATAGGAGCTATGATGCGATTGGGTTGATGAAACAGGTGAAGGAACAAACTGCGGCTGCGTATGCCAATGCTCAGGAGATTTTGGGAAGTGTAACTCCCAAAGCAAAAGATTCATCTGGGAATGTCAGGGACACAGACCGGGAAAGCAAGGATAATCTTGATCAGCCCGTGAATCATTCTCAGGTGCCCCGAAATGCATTGGTAGAGCGACGCATACTTGATTTCAGCGAGTGTAAAACACCAGGGAAGGAGGGCAACGGCAAAGGCTCTGCTCAGACCTTCTCAAGCCCTTCGTCATATTTGTTGAAGGGATGTAGATAG 3135 0.4293 MEGDRTTPASSDGLSDGAQKIKALHGRTTGPTRRSTKGQWTAEEDEILRMAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPTINKEAWTYEEELALVRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQFQDVPLAGHPNQPVVSTSSRRQYSGDDNGYKGTEGEEVSECSQDSANVSCFPSARDMTDVILNTTEELKPSEDISLGKSQSPSQASCLDPYCISLDDVTISIPDVAHEDASCSGFIEQTYSHDPGNSASRDTQFTLHALPNISSSDLDQECSLLRRDSEDCAESHDIVSVPLHTSVGLGISASMGPLSIDPAKQDHMLISSEECYRVQYSEAINDGCFSSGDYNKNVNTVSSGLALFAQSSDLHIPETGGTSTSFQTCPVKSNDLIGSSCSQSPMLSANDWRLVYTAEANNLFGADDLQFVSRAQDSFIYANNSSVAPCMDAINSVEMHEGQDTVKDASRLVPLNTFGSALDAKRTCPMEERTDVHIEQSETGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRRLMMSSMNCPTPLRLWDSPSRGDSPDSLLKSAAKSFTCTPSILKKRHRDLLSPLSDKRIDKKLETDLTSTLVTHFSRLEVMFDDNETREVDMLSQPLTENEKSEATVEDTENFGQSLEGEHAGGRNESTISNKKSEKETADSDPQDFQRPSYDDSKMKVDCDVDKAAEIGQQSSGVLIEHDMNDLLLYSPNQMCFKLDRTHCSSAKTPKNMNNRSLEASLNKSISSHPWPSDGFPSVRVKNLDVSSFPVPCVSSLCASAPAENLGDQPGNDAGFDTFSIFGGTPFRRSIESPSAWKSPWLMNTFLPSPRLDTEITIEDFGFFMSPRDRSYDAIGLMKQVKEQTAAAYANAQEILGSVTPKAKDSSGNVRDTDRESKDNLDQPVNHSQVPRNALVERRILDFSECKTPGKEGNGKGSAQTFSSPSSYLLKGCR 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0514 1044 Gene3D - 89 140 - -
Lele28g0514 1044 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Lele28g0514 1044 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Lele28g0514 1044 FunFam Transcriptional activator Myb isoform A 89 141 - -
Lele28g0514 1044 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Lele28g0514 1044 MobiDBLite consensus disorder prediction 1024 1038 - -
Lele28g0514 1044 MobiDBLite consensus disorder prediction 977 992 - -
Lele28g0514 1044 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Lele28g0514 1044 CDD SANT 143 183 IPR001005 -
Lele28g0514 1044 SMART sant 140 188 IPR001005 -
Lele28g0514 1044 SMART sant 36 85 IPR001005 -
Lele28g0514 1044 SMART sant 88 137 IPR001005 -
Lele28g0514 1044 MobiDBLite consensus disorder prediction 1016 1044 - -
Lele28g0514 1044 Gene3D - 142 201 - -
Lele28g0514 1044 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Lele28g0514 1044 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Lele28g0514 1044 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Lele28g0514 1044 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Lele28g0514 1044 MobiDBLite consensus disorder prediction 970 1002 - -
Lele28g0514 1044 CDD SANT 40 83 IPR001005 -
Lele28g0514 1044 MobiDBLite consensus disorder prediction 742 767 - -
Lele28g0514 1044 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Lele28g0514 1044 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Lele28g0514 1044 MobiDBLite consensus disorder prediction 209 239 - -
Lele28g0514 1044 MobiDBLite consensus disorder prediction 212 227 - -
Lele28g0514 1044 MobiDBLite consensus disorder prediction 705 767 - -
Lele28g0514 1044 FunFam Transcriptional activator Myb isoform A 36 88 - -
Lele28g0514 1044 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Lele28g0514 1044 Gene3D - 36 88 - -
Lele28g0514 1044 CDD SANT 91 135 IPR001005 -
Lele28g0514 1044 FunFam Transcription factor MYB3R-2 142 204 - -
Lele28g0514 1044 PANTHER MYB PROTEIN-RELATED 37 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0514 Lele-ChrLele28 3263959 3269330 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0514 21 1044 MYB Transcription Factor Family AT4G32730 44.135 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele28g0514 Myb_DNA-binding 5.4e-14 CL0123