Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0485 ATGCGCCGTCAGCAGCTTATAAGGGAGTGTCCCATTCTCTCCAACATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGCGAAAAGAAGCTTCACGCCTGCAAGCTGTAAACAGAAAACTGACGGCTATGAATAAACTGCTTATGGAAGAAAACGACAGATTGCAGAAACAGGTGTCCCAGCTGGTTTATGAGAACAGCTTTTTCCGGCAACAGACTCAGAATACGACTCTAGCAACCACGGACACAAGTTGCGAGTCGGTGGTGACGAGCGGTCAGCACCATTTGACACCTCAGCATCCACCAAGGGATGCAAGCCCAGCTGGACTTTTGTCCATTGCAGAGGAGACTCTTGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCACGGTTGCCCTGGAGTGGCAGCCCGTGCATGCGGCCTTGTGGGTCTGGAACCCACGAGGGTTGCTGAAATCCTCAAAGATCGGCCCTCATGGTGTCGCGATTGCCGAGCTGTGGATGTCCTAAACGCGATGCCCACTGGTAATGGGGGAACCATTGAACTGCTTTACATGCAGTTGTATGCCCCTACAACTTTGGCCCCAGCTCGTGACTTCTGGCTGCTGAGTTACACTTCAGTTTTGGAGGATGGCAGTCTTGTGGTCTGTGAAAGATCGCTTAACAACACTCAGAATGGTCCTACCATGCCACCAGCGCAGCATTTTGTGAGAGCAGATATTCTGCCAAGCGGGTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATCATTCATATTGTTGATCATGTCAACTTAGAGCCTTGGAGTGTGCCTGAAGTGTTACGCCCATTATATGAGTCGTCAACGTTGCTTGCTCAAAAGACAGCTATGGCGGCTTTACGTCATTTGAGGCAAATCTCTCAAGAAACTTCTCAGCCAAATGCCACCGGATGGGGAAGAAGGCCTGCAGCTTTGCGAGTACTGAGTCAGCGTTTGAGCAGGGGCTTCAATGAAGCTGTCAATGGATTTGCAGATGATGGCTGGTCTATGTTAGAAAGTGAAGGCATTGATGATGTCACCCTTCTTGTGAATTCATCTCCTAGCAAGACAATGGGGGTAAATATTGGTTATAACAATGGGTTTCTCCCTATGAGCAGTTCCGTGCTATGTGCAAAAGCATCCATGTTGTTACAGAATGTGCCTCCTGCAATTCTTCTAAGATTCTTGCGGCAGCATCGATCAGAGTGGGCAGATAGCAATATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGGTCCATGTACCTTGCCTGGGGTTCGAGCTGGAGGTTTTGGTGGTCAGGTTATTCTTCCACTGGCGCACACAATTGAGAATGAAGAGTTTATGGAGGTCATCAAGCTTGAAAATATGGGATACTATAGAGAAGACATGACTATTCCGGGTGATATTTTCCTTTTGCAACTTTGTAGTGGAGTAGATGAGCGTGCTGTTGGCACCTGTGCAGAACTCATTTTTGCTCCCATTGATGCATCTTTCTCTGATGATGCGCCCATTTTACCTTCTGGTTTCCGTATCATACCTCTTGATTCAAGCATGGATGCTGCTACTCCAAACCGAACACTTGATCTTGCTTCTGCTCTTGAAGTTGGAACCACTGGAAACAAATCAGCTGGTGATAATCTTGGACAATCTGGGAGCACAAAATCTGTGATGACAATAGCATTTCAGTTTGCATTTGAAGTCCATCTTCAAGATAGTGTAGCAGCGATGGCTCGGCAATATGTTCGGAGTATTATTGCATCTGTTCAAAGGGTAGCATTGGCACTATCCCCTTCCCACGTTGGTTTCCAAAACGGCCTTCGCCCACCACCTGGCACTCCTGAGGCACAAACACTTGCTCAGTGGATCTGTAATAGCCATAGGAGCTATCTAGGGGTAGAACTGCTAAAATGTGAAGGCAGTGAATCCATTCTCAATTCCCTTTGGCATCACTCGGATGCAGTCTTGTGCTGCTCTTTAAAGGCTCTGCCGCTTTTCACATTTGCAAATCAAGCGGGACTTGACATGCTTGAGACAACTTTGGTTGCTCTTCAAGACATCACTCTTGATAAAATTTTTGACGAGAATGGGAAGAAAGCCCTGTTCTCTGAGTTCCCCCAGATAATGCAGCAGGGCTTTATGTGCATGCAAGGAGGAATCTGCTTGTCCAGCATGGGAAGGCCAGTGTCTTATGAGAGAGCGGTTGCATGGAAAGTAATGAACGAAGAAGAAACGGCCCATTGCATTTGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2388 0.4753 MRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQNTTLATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWCRDCRAVDVLNAMPTGNGGTIELLYMQLYAPTTLAPARDFWLLSYTSVLEDGSLVVCERSLNNTQNGPTMPPAQHFVRADILPSGYLIRPCEGGGSIIHIVDHVNLEPWSVPEVLRPLYESSTLLAQKTAMAALRHLRQISQETSQPNATGWGRRPAALRVLSQRLSRGFNEAVNGFADDGWSMLESEGIDDVTLLVNSSPSKTMGVNIGYNNGFLPMSSSVLCAKASMLLQNVPPAILLRFLRQHRSEWADSNIDAYSAAAIKAGPCTLPGVRAGGFGGQVILPLAHTIENEEFMEVIKLENMGYYREDMTIPGDIFLLQLCSGVDERAVGTCAELIFAPIDASFSDDAPILPSGFRIIPLDSSMDAATPNRTLDLASALEVGTTGNKSAGDNLGQSGSTKSVMTIAFQFAFEVHLQDSVAAMARQYVRSIIASVQRVALALSPSHVGFQNGLRPPPGTPEAQTLAQWICNSHRSYLGVELLKCEGSESILNSLWHHSDAVLCCSLKALPLFTFANQAGLDMLETTLVALQDITLDKIFDENGKKALFSEFPQIMQQGFMCMQGGICLSSMGRPVSYERAVAWKVMNEEETAHCICFMFINWSFV 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0485 795 Pfam Homeodomain 2 34 IPR001356 GO:0003677
Lele28g0485 795 Gene3D - 1 33 - -
Lele28g0485 795 ProSiteProfiles 'Homeobox' domain profile. 1 35 IPR001356 GO:0003677
Lele28g0485 795 Pfam MEKHLA domain 654 794 IPR013978 -
Lele28g0485 795 Pfam START domain 120 328 IPR002913 GO:0008289
Lele28g0485 795 SUPERFAMILY Homeodomain-like 2 39 IPR009057 -
Lele28g0485 795 SMART START_1 119 329 IPR002913 GO:0008289
Lele28g0485 795 CDD START_ArGLABRA2_like 114 329 - -
Lele28g0485 795 Gene3D - 154 338 IPR023393 -
Lele28g0485 795 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 795 IPR044830 GO:0003700
Lele28g0485 795 SUPERFAMILY Bet v1-like 119 331 - -
Lele28g0485 795 ProSiteProfiles START domain profile. 110 338 IPR002913 GO:0008289
Lele28g0485 795 Coils Coil 31 72 - -
Lele28g0485 795 CDD bZIP 28 67 - -
Lele28g0485 795 CDD homeodomain 2 36 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0485 Lele-ChrLele28 3112671 3118024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0485 1 795 Homeobox Transcription Factor Family AT4G32880 80.476 0.0 1345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele28g0485 START 8.8e-52 CL0209