Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0481 ATGAATTTTGACACGACACGGATGAGTTATAGCTTCAAAAGATTAGTGAGACCTGCCTTGTTGTTTGGCTTTTCCGAGCCTACGTGTCAGCTTCTCTCTATCTCGGTCCAGGTTGGGGGTTCGCCAGTATATAGAATTGATAGAAAACTGGGAAAAGGAGGATTTGGACAAGTCTTTGTTGGCAGGCGTGTTGGTGCTAGAAATTCCATTGAACTGACCGGTCCTGGAGCTGTAGAGGTGGCCTTAAAGTTTGAGCATAGAAGCAGTAAAGGCTGCAACTCTGGACCACCATATGAGTGGCAGGTTTACAATGTGTTGGGTGGGAGTCACGGTGTTCCACGAGTTCATTATAAGGGGAGGCAAGGTGATTATTATATTATGGTAATGGATATGCTTGGCCCTAGTCTATGGGATGTGTGGAATAACAACTCTCATGCGATGTCTATAGCAATGGTAGCTTGTATTGCCATTGAGGCAATATCCATATTAGAGAAGATGCATTCTAGAGGCTATGTGCATGGTGATGTGAAACCTGAGAACTTCTTGCTTGGCCCCCCTGGAACTCCCGATGAGAAGAAGCTGTTTCTTGTCGATCTGGGATTAGCTACCAGATGGCGCGATAATTCATCAGGCCTTCATGTTGAGTATGATCAACGCCCTGATGTATTTAGGGGGACAGTACGATATGCTAGTGTGCATGCTCATCTTGGTAGAACTGGCAGCAGAAGAGATGACTTGGAATCTCTTGCTTATACACTGATCTTCCTTCTTCGTGGTCGGCTTCCGTGGCAAGGATATCAGGGAGAAAACAAAGGATTCCTTGTCTGTAAGAAGAAGATGGCCACATCCCCAGAAACTTTGTGCTGTTTTTGTCCTCAACCCTTTCGACAGTTTGTTGAGTATGTTGTGAATCTGAAGTTTGATGAAGAACCAAATTATGCAAAGTATATCTCCCTTTTTGATGGAAACGTTGGTCCGAATCCAGATATCAGGCCAATAAATACTGAGGGGGCTCAGAAACTTATGTTTCAGGTTGGTCATAAGAGAGGACGATTGACCATAGAAGATGATGACGAACAACAACCAAAGAAGAAGGTCAGAATGGGAATGCCAGCAACTCAATGGATCAGTGTTTACAATGCTCGTCGGCCAATGAAGCAAAGGTATCATTATAATGTGGCAGATATGCGCCTGTCCCAACACATTGAGAAAGGAAATGAGGATGGGTTATTTATAAGCAGTGTGGCTTCTTGTTCCAATCTTTGGGCACTAATCATGGATGCTGGAACTGGTTTCTCTTCACAAGTTTACGAACTCTCACCCGATTTTCTTCATAAGGAATGGATTATGGAACAATGGGAAAAAAATTATTACATCAGTGCTATAGCTGGCGCTAATAATGGAAGCTCATTGGTTGTAATGTCTAAAGGGACCCAGTACCTGCAGCAGTCCTATAAAGTCAGCGATTCATTCCCATTTAAGTGGATTAATAAAAAATGGAGGGAGGGCTTTTATGTCACTGCCATGGCAACTGCTGGAAGTAGATGGGCAATTGTCATGTCCCGTGGTGCAGGATTTTCAGATCAGGTTGTGGAACTTGATTTCCTGTATCCCAGTGAAGGTATTCACCAGAGGTGGGATAACGGTTACCGTATCACATCTACTGCTGCGACATGGGACCAAGCTGCTTTAATTCTTAGCGTCCCGAGAAGAAAACCAGCTGATGAAACTCAAGAGACGCTTCGTACATCTGCATTCCCTAGTACTCATGTCAAGGAAAAATGGGCCAAGAATTTGTATATAGCATCTATTTGTTATGGGAGAACGGTTTCATGA 1836 0.4379 MNFDTTRMSYSFKRLVRPALLFGFSEPTCQLLSISVQVGGSPVYRIDRKLGKGGFGQVFVGRRVGARNSIELTGPGAVEVALKFEHRSSKGCNSGPPYEWQVYNVLGGSHGVPRVHYKGRQGDYYIMVMDMLGPSLWDVWNNNSHAMSIAMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDNSSGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGNVGPNPDIRPINTEGAQKLMFQVGHKRGRLTIEDDDEQQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFSSQVYELSPDFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHQRWDNGYRITSTAATWDQAALILSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0481 611 PANTHER CASEIN KINASE-RELATED 48 577 - -
Lele28g0481 611 FunFam casein kinase 1-like protein HD16 25 367 - -
Lele28g0481 611 Pfam Protein kinase domain 44 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0481 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Lele28g0481 611 ProSiteProfiles Protein kinase domain profile. 44 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0481 611 CDD STKc_CK1 44 320 - -
Lele28g0481 611 ProSitePatterns Protein kinases ATP-binding region signature. 50 83 IPR017441 GO:0005524
Lele28g0481 611 SUPERFAMILY Protein kinase-like (PK-like) 44 321 IPR011009 -
Lele28g0481 611 Gene3D Transferase(Phosphotransferase) domain 1 35 369 - -
Lele28g0481 611 SMART serkin_6 44 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0481 Lele-ChrLele28 3084459 3087992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0481 163 320 MAP Kinase Kinase Kinase AT5G50180 26.250 4.13e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lele28g0481 Pkinase 4e-15 CL0016